RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
SFXN1-209ENST00000508290 SLC18A3Q16572 532 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 INO80DQ53TQ3 878 aaPredicted RBP20.28■□□□□ 0.84
SFXN1-209ENST00000508290 CCDC122Q5T0U0 273 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 NEK5Q6P3R8 708 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 LINGO4Q6UY18 593 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 PYROXD2Q8N2H3 581 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 OR14C36Q8NHC7 312 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 C1orf216Q8TAB5 229 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 SNX19Q92543 992 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 SNRNP25Q9BV90 132 aaKnown RBP20.28■□□□□ 0.84
SFXN1-209ENST00000508290 THAP2Q9H0W7 228 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 DEF6Q9H4E7 631 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 DHX35Q9H5Z1 703 aaKnown RBP20.28■□□□□ 0.84
SFXN1-209ENST00000508290 NDFIP2Q9NV92 336 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 DNAAF2Q9NVR5 837 aaKnown RBP20.28■□□□□ 0.84
SFXN1-209ENST00000508290 SERGEFQ9UGK8 458 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 IL36AQ9UHA7 158 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 DOCK4Q8N1I0 1966 aa20.28■□□□□ 0.84
SFXN1-209ENST00000508290 DCDC2BA2VCK2 349 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 C10orf142B7Z368 130 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 K7ERQ8 282 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 EEF2KO00418 725 aaKnown RBP20.27■□□□□ 0.84
SFXN1-209ENST00000508290 SMAD6O43541 496 aaKnown RBP20.27■□□□□ 0.84
SFXN1-209ENST00000508290 PLRG1O43660 514 aaKnown RBP20.27■□□□□ 0.84
SFXN1-209ENST00000508290 BNIP3LO60238 219 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 OPHN1O60890 802 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 CSRP1P21291 193 aaKnown RBP20.27■□□□□ 0.84
SFXN1-209ENST00000508290 GLDCP23378 1020 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 MAOBP27338 520 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 ACVRL1P37023 503 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 CARD16Q5EG05 197 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 NCEH1Q6PIU2 408 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 ZSCAN30Q86W11 494 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 CTNNBL1Q8WYA6 563 aaPredicted RBP20.27■□□□□ 0.84
SFXN1-209ENST00000508290 ZWILCHQ9H900 591 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 PREBQ9HCU5 417 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 ABHD10Q9NUJ1 306 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 UVRAGQ9P2Y5 699 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 PCSK1NQ9UHG2 260 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 NENFQ9UMX5 172 aa20.27■□□□□ 0.84
SFXN1-209ENST00000508290 A0A1W2PPC4 97 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 FAM47DPA6NHR8 397 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 MYO1FO00160 1098 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 KPNA3O00505 521 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-209ENST00000508290 DAPK3O43293 454 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 MFAP3LO75121 409 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 CER1O95813 267 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 GSRP00390 522 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 IGHV4-34P06331 123 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 EIF4A3P38919 411 aaKnown RBP20.26■□□□□ 0.83
SFXN1-209ENST00000508290 MAPK8P45983 427 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 SNRPD1P62314 119 aaKnown RBP20.26■□□□□ 0.83
SFXN1-209ENST00000508290 RACK1P63244 317 aaKnown RBP20.26■□□□□ 0.83
SFXN1-209ENST00000508290 GRIK2Q13002 908 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-209ENST00000508290 RFX8Q6ZV50 586 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 LZTR1Q8N653 840 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 ARFGAP1Q8N6T3 406 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 TEKT4Q8WW24 435 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 HEPHQ9BQS7 1158 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 NUP85Q9BW27 656 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 GTPBP2Q9BX10 602 aaKnown RBP20.26■□□□□ 0.83
SFXN1-209ENST00000508290 OSBPL1AQ9BXW6 950 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 HDAC8Q9BY41 377 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 TRIM7Q9C029 511 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 ANAPC7Q9UJX3 599 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 SARDHQ9UL12 918 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 DMTF1Q9Y222 760 aa20.26■□□□□ 0.83
SFXN1-209ENST00000508290 LATO43561 262 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 H2AFZP0C0S5 128 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 ZNF883P0CG24 379 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 ARL4AP40617 200 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 RAD51Q06609 339 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 CNTN1Q12860 1018 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 SERINC3Q13530 473 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 HNRNPDQ14103 355 aaKnown RBP20.25■□□□□ 0.83
SFXN1-209ENST00000508290 DPYSL2Q16555 572 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 SLC45A4Q5BKX6 768 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 PPM1JQ5JR12 505 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 AGBL4Q5VU57 503 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 DPY19L3Q6ZPD9 716 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 H2AFVQ71UI9 128 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 TRIM69Q86WT6 500 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 ZNF354CQ86Y25 554 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 DNAAF5Q86Y56 855 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 MINDY1Q8N5J2 469 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 OR2AP1Q8NGE2 309 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 MAGEB5Q9BZ81 275 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 SLC32A1Q9H598 525 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 TM9SF3Q9HD45 589 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 DCHS1Q96JQ0 3298 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 CEP192Q8TEP8 1941 aa20.25■□□□□ 0.83
SFXN1-209ENST00000508290 NYNRINQ9P2P1 1898 aaKnown RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3DA0A087WVF3 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3IA0A087WXS9 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3EA0A087X179 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3KA0A087X1G2 549 aa20.24■□□□□ 0.83
SFXN1-209ENST00000508290 TBC1D3FA6NER0 549 aaPredicted RBP20.24■□□□□ 0.83
SFXN1-209ENST00000508290 ARHGAP42A6NI28 874 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms