RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 ARHGAP25P42331 645 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 HARS2P49590 506 aaKnown RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 EIF5P55010 431 aaKnown RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 ZNF91Q05481 1191 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 DAZAP2Q15038 168 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 RPE65Q16518 533 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 MIDNQ504T8 468 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 ALG10Q5BKT4 473 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 ALG10BQ5I7T1 473 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 KIAA1614Q5VZ46 1190 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 SLC18B1Q6NT16 456 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 TMEM81Q6P7N7 255 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 WDR5BQ86VZ2 330 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 DDIASQ8IXT1 998 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 DIS3L2Q8IYB7 885 aaKnown RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 PLD5Q8N7P1 536 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 ADAMTS15Q8TE58 950 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 HDAC7Q8WUI4 952 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 CENPIQ92674 756 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 USP44Q9H0E7 712 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 CXorf56Q9H5V9 222 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 ADARB2Q9NS39 739 aaKnown RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 ZDHHC7Q9NXF8 308 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 MPP6Q9NZW5 540 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 AGO2Q9UKV8 859 aaKnown RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 MST1RQ04912 1400 aa4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 COL11A2P13942 1736 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P28-201ENST00000507778 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 TEX13CA0A0J9YWL9 993 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 PABPN1LA6NDY0 278 aaKnown RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 TMCC1O94876 653 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 HSPA1AP0DMV8 641 aaKnown RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 HSPA1BP0DMV9 641 aaKnown RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 ABCD1P33897 745 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 BLKP51451 505 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 CLCNKBP51801 687 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 ARSFP54793 590 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 INHBEP58166 350 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 ID2Q02363 134 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 CYP4A11Q02928 519 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 EDRF1Q3B7T1 1238 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 SLC9B1Q4ZJI4 515 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 ZNF667Q5HYK9 610 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 PAPD7Q5XG87 772 aaKnown RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 ZNF793Q6ZN11 406 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 DEF8Q6ZN54 512 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 TMTC3Q6ZXV5 915 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 B4GALNT4Q76KP1 1039 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 YTHDF3Q7Z739 585 aaKnown RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 CPLX4Q7Z7G2 160 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 TADA2BQ86TJ2 420 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 FAM185AQ8N0U4 392 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 DPP10Q8N608 796 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 C11orf65Q8NCR3 313 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 KCNG4Q8TDN1 519 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 WIPF2Q8TF74 440 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 DDB2Q92466 427 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 SAAL1Q96ER3 474 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 ZNF419Q96HQ0 510 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 LBHD1Q9BQE6 289 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 AAMDCQ9H7C9 122 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 BABAM1Q9NWV8 329 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 TBC1D14Q9P2M4 693 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 CDH22Q9UJ99 828 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 PCDHGB5Q9Y5G0 923 aa4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 TDRD9Q8NDG6 1382 aaKnown RBP4.34□□□□□ -1.71
HMGB1P28-201ENST00000507778 KDM3AQ9Y4C1 1321 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 TRBV5-3A0A0A0MS03 114 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 TRBV5-7A0A0A0MS05 114 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 KCNU1A8MYU2 1149 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 FAM157AC9JC47 383 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 RNMTO43148 476 aaKnown RBP4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 TNFSF14O43557 240 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 USO1O60763 962 aaKnown RBP4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 GALTP07902 379 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 YWHAQP27348 245 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 FMO4P31512 558 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 DPP6P42658 865 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 DCAF7P61962 342 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 YWHAZP63104 245 aaKnown RBP4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 SRSF4Q08170 494 aaKnown RBP4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 NEXNQ0ZGT2 675 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 ME3Q16798 604 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 SUPT20HL1Q3ZLR7 823 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 SYTL3Q4VX76 610 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 ENTPD8Q5MY95 495 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 GPATCH4Q5T3I0 446 aaKnown RBP4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 TBC1D9BQ66K14 1250 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 MOB3CQ70IA8 216 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 PCGF5Q86SE9 256 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 FAM160B2Q86V87 743 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 SLC25A41Q8N5S1 370 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 SLC44A5Q8NCS7 719 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 CMASQ8NFW8 434 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 METTL6Q8TCB7 284 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 IGFBPL1Q8WX77 278 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 KLHL29Q96CT2 875 aa4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 NR1H4Q96RI1 486 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P28-201ENST00000507778 WDR83Q9BRX9 315 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms