RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GJC1P36383 396 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 SLC1A1P43005 524 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 PTGER3P43115 390 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 CDH6P55285 790 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 MESDQ14696 234 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 INO80DQ53TQ3 878 aaPredicted RBP17.01■□□□□ 0.31
SNCA-209ENST00000506244 PRR23CQ6ZRP0 262 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 PLPP6Q8IY26 295 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 KIAA2013Q8IYS2 634 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 OR2A12Q8NGT7 310 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 PIGKQ92643 395 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 ZNF419Q96HQ0 510 aaPredicted RBP17.01■□□□□ 0.31
SNCA-209ENST00000506244 CSPG4P5Q96PW8 444 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 LRRC19Q9H756 370 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 PCDH18Q9HCL0 1135 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 DYRK4Q9NR20 520 aa17.01■□□□□ 0.31
SNCA-209ENST00000506244 TPX2Q9ULW0 747 aaKnown RBP17.01■□□□□ 0.31
SNCA-209ENST00000506244 TNRC6BQ9UPQ9 1833 aaKnown RBP17■□□□□ 0.31
SNCA-209ENST00000506244 A0A1W2PP55 124 aa17■□□□□ 0.31
SNCA-209ENST00000506244 SOWAHDA6NJG2 315 aa17■□□□□ 0.31
SNCA-209ENST00000506244 LRRC72A6NJI9 287 aa17■□□□□ 0.31
SNCA-209ENST00000506244 PRR5-ARHGAP8B1AHC4 643 aa17■□□□□ 0.31
SNCA-209ENST00000506244 GSRP00390 522 aa17■□□□□ 0.31
SNCA-209ENST00000506244 CHRNA3P32297 505 aa17■□□□□ 0.31
SNCA-209ENST00000506244 HADHBP55084 474 aaKnown RBP17■□□□□ 0.31
SNCA-209ENST00000506244 SNRPD1P62314 119 aaKnown RBP17■□□□□ 0.31
SNCA-209ENST00000506244 ARHGAP8P85298 464 aa17■□□□□ 0.31
SNCA-209ENST00000506244 PDK2Q15119 407 aa17■□□□□ 0.31
SNCA-209ENST00000506244 ZFYVE27Q5T4F4 411 aa17■□□□□ 0.31
SNCA-209ENST00000506244 PEAR1Q5VY43 1037 aaPredicted RBP17■□□□□ 0.31
SNCA-209ENST00000506244 RALGAPA1Q6GYQ0 2036 aa17■□□□□ 0.31
SNCA-209ENST00000506244 RGL4Q8IZJ4 473 aa17■□□□□ 0.31
SNCA-209ENST00000506244 TXLNBQ8N3L3 684 aa17■□□□□ 0.31
SNCA-209ENST00000506244 HDDC3Q8N4P3 179 aa17■□□□□ 0.31
SNCA-209ENST00000506244 TMIEQ8NEW7 156 aa17■□□□□ 0.31
SNCA-209ENST00000506244 CEP76Q8TAP6 659 aa17■□□□□ 0.31
SNCA-209ENST00000506244 PIP4K2CQ8TBX8 421 aa17■□□□□ 0.31
SNCA-209ENST00000506244 NUP205Q92621 2012 aa17■□□□□ 0.31
SNCA-209ENST00000506244 CELF6Q96J87 481 aaKnown RBP17■□□□□ 0.31
SNCA-209ENST00000506244 CALR3Q96L12 384 aaKnown RBP17■□□□□ 0.31
SNCA-209ENST00000506244 BAG1Q99933 345 aaPredicted RBP17■□□□□ 0.31
SNCA-209ENST00000506244 ZNF670Q9BS34 389 aa17■□□□□ 0.31
SNCA-209ENST00000506244 TNKS2Q9H2K2 1166 aa17■□□□□ 0.31
SNCA-209ENST00000506244 SP110Q9HB58 689 aa17■□□□□ 0.31
SNCA-209ENST00000506244 PARD6AQ9NPB6 346 aa17■□□□□ 0.31
SNCA-209ENST00000506244 UBA2Q9UBT2 640 aaPredicted RBP17■□□□□ 0.31
SNCA-209ENST00000506244 IL36AQ9UHA7 158 aa17■□□□□ 0.31
SNCA-209ENST00000506244 PPM1HQ9ULR3 514 aa17■□□□□ 0.31
SNCA-209ENST00000506244 FCF1Q9Y324 198 aaKnown RBP17■□□□□ 0.31
SNCA-209ENST00000506244 PCDHA13Q9Y5I0 950 aa17■□□□□ 0.31
SNCA-209ENST00000506244 EPN1Q9Y6I3 576 aaPredicted RBP17■□□□□ 0.31
SNCA-209ENST00000506244 SDK1Q7Z5N4 2213 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 A0A0A6YYK5 440 aaPredicted RBP16.99■□□□□ 0.31
SNCA-209ENST00000506244 TMCC1O94876 653 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 GNSP15586 552 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 SDHBP21912 280 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 ITPKAP23677 461 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 ACSL1P33121 698 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 DNA2P51530 1060 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 GSDMDP57764 484 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 AASDHQ4L235 1098 aaPredicted RBP16.99■□□□□ 0.31
SNCA-209ENST00000506244 CARD16Q5EG05 197 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 AFMIDQ63HM1 303 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 TXNRD3NBQ6F5E7 133 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 DPY19L3Q6ZPD9 716 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 SLC41A1Q8IVJ1 513 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 AADATQ8N5Z0 425 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 DEFB119Q8N690 84 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 SPC24Q8NBT2 197 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 KCTD6Q8NC69 237 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 OR2AP1Q8NGE2 309 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 FAM71BQ8TC56 605 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 GRIN3AQ8TCU5 1115 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 TSC1Q92574 1164 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 LRIG1Q96JA1 1093 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 GDAP1L1Q96MZ0 367 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 HEPHQ9BQS7 1158 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 CALN1Q9BXU9 219 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 TM6SF2Q9BZW4 377 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 EVLQ9UI08 416 aaPredicted RBP16.99■□□□□ 0.31
SNCA-209ENST00000506244 PILRBQ9UKJ0 227 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 CEP192Q8TEP8 1941 aa16.99■□□□□ 0.31
SNCA-209ENST00000506244 ATXN2Q99700 1313 aaKnown RBP16.98■□□□□ 0.31
SNCA-209ENST00000506244 METTL12A8MUP2 240 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 DFFAO00273 331 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 KPNA3O00505 521 aaPredicted RBP16.98■□□□□ 0.31
SNCA-209ENST00000506244 KHNYNO15037 678 aaKnown RBP16.98■□□□□ 0.31
SNCA-209ENST00000506244 SPOPO43791 374 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 PRAMEF11O60813 436 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 IGSF6O95976 241 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 TGM1P22735 817 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 NOP2P46087 812 aaKnown RBP16.98■□□□□ 0.31
SNCA-209ENST00000506244 CCNHP51946 323 aaPredicted RBP16.98■□□□□ 0.31
SNCA-209ENST00000506244 RHOAP61586 193 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 RAD51Q06609 339 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 ODF2Q5BJF6 829 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 LRRC38Q5VT99 294 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 DCAF12L1Q5VU92 463 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 RYBPQ8N488 228 aaPredicted RBP16.98■□□□□ 0.31
SNCA-209ENST00000506244 NPWQ8N729 165 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms