RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SLC16A12Q6ZSM3 486 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 HORMAD2Q8N7B1 307 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 ZNF366Q8N895 744 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 C9orf106Q8NAJ2 232 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 LPAR1Q92633 364 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 URB1-AS1Q96HZ7 61 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 TEFMQ96QE5 360 aaKnown RBP4.18□□□□□ -1.74
CHD1-203ENST00000505657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.18□□□□□ -1.74
CHD1-203ENST00000505657 ISCUQ9H1K1 167 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 TASP1Q9H6P5 420 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 TMEM160Q9NX00 188 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 INSL5Q9Y5Q6 135 aa4.18□□□□□ -1.74
CHD1-203ENST00000505657 STMND1H3BQB6 276 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 I6L893 689 aaPredicted RBP4.17□□□□□ -1.74
CHD1-203ENST00000505657 TNFRSF13BO14836 293 aaPredicted RBP4.17□□□□□ -1.74
CHD1-203ENST00000505657 NCAM2O15394 837 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 ANP32CO43423 234 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 CLDN7O95471 211 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 ADAP00813 363 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 WEE2P0C1S8 567 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 TNNT1P13805 278 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 DPP6P42658 865 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 PPM1FP49593 454 aaPredicted RBP4.17□□□□□ -1.74
CHD1-203ENST00000505657 CLCNKBP51801 687 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 UBE3AQ05086 875 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 CHRNDQ07001 517 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 TDGQ13569 410 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 TAF12Q16514 161 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 SLC18A3Q16572 532 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 ME3Q16798 604 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 ATG16L1Q676U5 607 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 ZNF549Q6P9A3 640 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 FAM185AQ8N0U4 392 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 CPXCR1Q8N123 301 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 USP38Q8NB14 1042 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 LSM14AQ8ND56 463 aaKnown RBP4.17□□□□□ -1.74
CHD1-203ENST00000505657 C7orf57Q8NEG2 295 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 TTYH1Q9H313 450 aaPredicted RBP4.17□□□□□ -1.74
CHD1-203ENST00000505657 KLHL31Q9H511 634 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 TTC12Q9H892 705 aaPredicted RBP4.17□□□□□ -1.74
CHD1-203ENST00000505657 GRHL1Q9NZI5 618 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 HSF4Q9ULV5 492 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 DHDHQ9UQ10 334 aa4.17□□□□□ -1.74
CHD1-203ENST00000505657 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.16□□□□□ -1.74
CHD1-203ENST00000505657 FAM90A10PA6NDY2 464 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 RRN3P2A6NIE6 340 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 SH2D7A6NKC9 451 aaPredicted RBP4.16□□□□□ -1.74
CHD1-203ENST00000505657 BECN2A8MW95 431 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 HSPB6O14558 160 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 HBP1O60381 514 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 KLKB1P03952 638 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 HOXA11P31270 313 aaPredicted RBP4.16□□□□□ -1.74
CHD1-203ENST00000505657 SKIV2L2P42285 1042 aaKnown RBP4.16□□□□□ -1.74
CHD1-203ENST00000505657 MAPK9P45984 424 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 CCT5P48643 541 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 GOLGA8FQ08AF8 430 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 DUSP6Q16828 381 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 TMEM268Q5VZI3 342 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 ZNF354CQ86Y25 554 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 OR4N2Q8NGD1 307 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 CEP76Q8TAP6 659 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 ATOH1Q92858 354 aaPredicted RBP4.16□□□□□ -1.74
CHD1-203ENST00000505657 NPLQ9BXD5 320 aaPredicted RBP4.16□□□□□ -1.74
CHD1-203ENST00000505657 KRTAP1-5Q9BYS1 174 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 LHPPQ9H008 270 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 SLC32A1Q9H598 525 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 ATP8A2Q9NTI2 1148 aa4.16□□□□□ -1.74
CHD1-203ENST00000505657 GAGE12JA6NER3 117 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 PER2O15055 1255 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 LCATP04180 440 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 PYGLP06737 847 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 SCP2P22307 547 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 TBXAS1P24557 533 aaPredicted RBP4.15□□□□□ -1.75
CHD1-203ENST00000505657 ARRB2P32121 409 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 AVPR1AP37288 418 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 RASSF2P50749 326 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 POLGP54098 1239 aaPredicted RBP4.15□□□□□ -1.75
CHD1-203ENST00000505657 PMS2P54278 862 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.75
CHD1-203ENST00000505657 WDR45BQ5MNZ6 344 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 GORABQ5T7V8 394 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 DAB2IPQ5VWQ8 1189 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 C9orf47Q6ZRZ4 202 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 Q6ZSV7 163 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 Q6ZTK2 550 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 SERPINA11Q86U17 422 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 GHDCQ8N2G8 530 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 GABPB2Q8TAK5 448 aaPredicted RBP4.15□□□□□ -1.75
CHD1-203ENST00000505657 RAB40AQ8WXH6 277 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 ELP4Q96EB1 424 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 MAELQ96JY0 434 aaKnown RBP4.15□□□□□ -1.75
CHD1-203ENST00000505657 APOLD1Q96LR9 279 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 TAOK3Q9H2K8 898 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 EPHX3Q9H6B9 360 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 PLAC1Q9HBJ0 212 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 WDR6Q9NNW5 1121 aaKnown RBP4.15□□□□□ -1.75
CHD1-203ENST00000505657 KRCC1Q9NPI7 259 aaPredicted RBP4.15□□□□□ -1.75
CHD1-203ENST00000505657 SEL1LQ9UBV2 794 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 CLDN16Q9Y5I7 305 aa4.15□□□□□ -1.75
CHD1-203ENST00000505657 RAI2Q9Y5P3 530 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms