RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SIX2Q9NPC8 291 aa6□□□□□ -1.45
GYPB-205ENST00000505583 PLCB1Q9NQ66 1216 aa6□□□□□ -1.45
GYPB-205ENST00000505583 PIGVQ9NUD9 493 aa6□□□□□ -1.45
GYPB-205ENST00000505583 MPP6Q9NZW5 540 aa6□□□□□ -1.45
GYPB-205ENST00000505583 VPS51Q9UID3 782 aa6□□□□□ -1.45
GYPB-205ENST00000505583 KLF15Q9UIH9 416 aa6□□□□□ -1.45
GYPB-205ENST00000505583 VPS28Q9UK41 221 aa6□□□□□ -1.45
GYPB-205ENST00000505583 ZFR2Q9UPR6 939 aaKnown RBP6□□□□□ -1.45
GYPB-205ENST00000505583 DMTF1Q9Y222 760 aa6□□□□□ -1.45
GYPB-205ENST00000505583 HS3ST2Q9Y278 367 aa6□□□□□ -1.45
GYPB-205ENST00000505583 TBC1D30Q9Y2I9 924 aa6□□□□□ -1.45
GYPB-205ENST00000505583 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6□□□□□ -1.45
GYPB-205ENST00000505583 ACTL7AQ9Y615 435 aa6□□□□□ -1.45
GYPB-205ENST00000505583 PTPRQQ9UMZ3 2332 aa6□□□□□ -1.45
GYPB-205ENST00000505583 TRPM6Q9BX84 2022 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CHD5Q8TDI0 1954 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.99□□□□□ -1.45
GYPB-205ENST00000505583 PMS2P1A4D2B8 440 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 GOLGA6L4A6NEF3 574 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 POM121BA6NF01 834 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 EIF4E1BA6NMX2 242 aaKnown RBP5.99□□□□□ -1.45
GYPB-205ENST00000505583 CYSRT1A8MQ03 144 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 M0QYT0 321 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 MED7O43513 233 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 OPA1O60313 960 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 HSF2BPO75031 334 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 PIAS2O75928 621 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ENDOD1O94919 500 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 MT-CO3P00414 261 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 MPOP05164 745 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CDK4P11802 303 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ZNF18P17022 549 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 PON1P27169 355 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CHRNA3P32297 505 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 SOX11P35716 441 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CXADRP78310 365 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CDK17Q00537 523 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 KCNMA1Q12791 1236 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CETN1Q12798 172 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 OVGP1Q12889 678 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ZNF177Q13360 481 aaPredicted RBP5.99□□□□□ -1.45
GYPB-205ENST00000505583 ILKQ13418 452 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 STIM1Q13586 685 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 MEA1Q16626 185 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 TBC1D25Q3MII6 688 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 PTPN20Q4JDL3 420 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 SETMARQ53H47 684 aaPredicted RBP5.99□□□□□ -1.45
GYPB-205ENST00000505583 RAB6CQ53S08 254 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 C2CD6Q53TS8 623 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 RABGAP1LQ5R372 815 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 TTC39BQ5VTQ0 682 aaPredicted RBP5.99□□□□□ -1.45
GYPB-205ENST00000505583 FAM46CQ5VWP2 391 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CDCP2Q5VXM1 449 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 OR6B2Q6IFH4 312 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 TRNP1Q6NT89 227 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 DPY19L2P1Q6NXN4 242 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 FOXR2Q6PJQ5 311 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 GCNT7Q6ZNI0 430 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 LRRC69Q6ZNQ3 347 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 TFAP2DQ7Z6R9 452 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ABI3BPQ7Z7G0 1075 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 DSG4Q86SJ6 1040 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 SLC47A2Q86VL8 602 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 HORMAD1Q86X24 394 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 IRF2BP1Q8IU81 584 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 OXR1Q8N573 874 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ATP11CQ8NB49 1132 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 C1orf131Q8NDD1 294 aaKnown RBP5.99□□□□□ -1.45
GYPB-205ENST00000505583 OR7D4Q8NG98 312 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 OR4C6Q8NH72 309 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 GRIN3AQ8TCU5 1115 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 SHC3Q92529 594 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 RNF34Q969K3 372 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CCDC34Q96HJ3 373 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 HIC2Q96JB3 615 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 APOLD1Q96LR9 279 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 NPY6RQ99463 290 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 TRIM62Q9BVG3 475 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CALN1Q9BXU9 219 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 RAB6CQ9H0N0 254 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 MUC3BQ9H195 1237 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 OSBPL2Q9H1P3 480 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 CPNE5Q9HCH3 593 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 GPR27Q9NS67 375 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 KLHL11Q9NVR0 708 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ARHGEF38Q9NXL2 777 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 ZNF212Q9UDV6 495 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 SLC25A13Q9UJS0 675 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 WASF2Q9Y6W5 498 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 KIF26BQ2KJY2 2108 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 LRRK1Q38SD2 2015 aa5.99□□□□□ -1.45
GYPB-205ENST00000505583 BICDL2A1A5D9 508 aa5.98□□□□□ -1.45
GYPB-205ENST00000505583 DRGXA6NNA5 263 aa5.98□□□□□ -1.45
GYPB-205ENST00000505583 C1QTNF3-AMACRE9PGA6 284 aa5.98□□□□□ -1.45
GYPB-205ENST00000505583 K7ESM1 405 aa5.98□□□□□ -1.45
GYPB-205ENST00000505583 FOXN3O00409 490 aaPredicted RBP5.98□□□□□ -1.45
GYPB-205ENST00000505583 ALOX15BO15296 676 aa5.98□□□□□ -1.45
GYPB-205ENST00000505583 RRP8O43159 456 aaKnown RBP5.98□□□□□ -1.45
GYPB-205ENST00000505583 SPINT1O43278 529 aa5.98□□□□□ -1.45
GYPB-205ENST00000505583 USP12O75317 370 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms