RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 LCLAT1Q6UWP7 414 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 TAC4Q86UU9 113 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 IQCHQ86VS3 1027 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 CIR1Q86X95 450 aaPredicted RBP9.32□□□□□ -0.92
DHFR-202ENST00000504396 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 PPM1KQ8N3J5 372 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 ZDHHC1Q8WTX9 485 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 TFAP2BQ92481 460 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 KLK6Q92876 244 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 PTPRN2Q92932 1015 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 RNF34Q969K3 372 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 HSFY1Q96LI6 401 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 DEPDC7Q96QD5 511 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 SPAG5Q96R06 1193 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 CALN1Q9BXU9 219 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 OSBPL2Q9H1P3 480 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 XPO7Q9UIA9 1087 aaKnown RBP9.32□□□□□ -0.92
DHFR-202ENST00000504396 SLC25A13Q9UJS0 675 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 NAALADL1Q9UQQ1 740 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 DMTF1Q9Y222 760 aa9.32□□□□□ -0.92
DHFR-202ENST00000504396 HELZ2Q9BYK8 2649 aaKnown RBP9.32□□□□□ -0.92
DHFR-202ENST00000504396 SYNJ2BP-COX16A0A087WUM0 186 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 PRAMEF26H0Y7S4 382 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 SLC31A1O15431 190 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 SLC7A4O43246 635 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 LATO43561 262 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 PLRG1O43660 514 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 CSO75390 466 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 CALCAP01258 141 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ALPPL2P10696 532 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 PRLRP16471 622 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 TACR2P21452 398 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 DRD3P35462 400 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 OXCT1P55809 520 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 KRT85P78386 507 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 RHDQ02161 417 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 SULT2A1Q06520 285 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 CNTN1Q12860 1018 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ZNF211Q13398 564 aaPredicted RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 PKP1Q13835 747 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 LY6DQ14210 128 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 NFKBIBQ15653 356 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 CNGA2Q16280 664 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 COBLL1Q53SF7 1204 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ZC3H12AQ5D1E8 599 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 ARSJQ5FYB0 599 aaPredicted RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 KRBA2Q6ZNG9 492 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 BEND5Q7L4P6 421 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 UBR7Q8N806 425 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 SLC35F5Q8WV83 523 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 RFFLQ8WZ73 363 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 FAM131CQ96AQ9 280 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ABHD17AQ96GS6 310 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ZNF578Q96N58 590 aaPredicted RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 NT5C1BQ96P26 610 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.31□□□□□ -0.92
DHFR-202ENST00000504396 GTPBP4Q9BZE4 634 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 FAM204AQ9H8W3 233 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 FZD3Q9NPG1 666 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 UCKL1Q9NWZ5 548 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 COX16Q9P0S2 106 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 SETXQ7Z333 2677 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 PTPRQQ9UMZ3 2332 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ARID1BQ8NFD5 2236 aaPredicted RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 A0A1B0GVM2 712 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 A0A1W2PQ27 194 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 A0A1W2PQ64 194 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 PMM2O15305 246 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 RNGTTO60942 597 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 MYF5P13349 255 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 DGKAP23743 735 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 FKBP3Q00688 224 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 C3orf38Q5JPI3 329 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 RABGAP1LQ5R372 815 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 AGBL4Q5VU57 503 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 PCSK4Q6UW60 755 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 KANSL1Q7Z3B3 1105 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 TRIM69Q86WT6 500 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 LSMEM2Q8N112 164 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 CCAR2Q8N163 923 aaKnown RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 FAM181AQ8N9Y4 354 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 OR4C6Q8NH72 309 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 BTN2A3PQ96KV6 586 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 PPP1R9BQ96SB3 815 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 DYRK4Q9NR20 520 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 THSD1Q9NS62 852 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 RMND1Q9NWS8 449 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ARHGAP20Q9P2F6 1191 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 ARMCX3Q9UH62 379 aaPredicted RBP9.31□□□□□ -0.92
DHFR-202ENST00000504396 SLC12A6Q9UHW9 1150 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 SARDHQ9UL12 918 aa9.31□□□□□ -0.92
DHFR-202ENST00000504396 A0A1W2PNR3 127 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 A0A1W2PQU0 124 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 KPNA3O00505 521 aaPredicted RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 ALOX15BO15296 676 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 OPA1O60313 960 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 KRT5P13647 590 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 AKT2P31751 481 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 KCNMA1Q12791 1236 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms