RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 GOLGA4Q13439 2230 aaKnown RBP16.62■□□□□ 0.25
SCLT1-204ENST00000503215 TEX33O43247 280 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 PRLRP16471 622 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
SCLT1-204ENST00000503215 SDC4P31431 198 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 GRK6P43250 576 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 NXPH1P58417 271 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 BNIP3Q12983 259 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 NAPEPLDQ6IQ20 393 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 RWDD4Q6NW29 188 aaKnown RBP16.61■□□□□ 0.25
SCLT1-204ENST00000503215 WDR59Q6PJI9 974 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 LEKR1Q6ZMV7 388 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 NLRP14Q86W24 1093 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 TRIM69Q86WT6 500 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 PHF13Q86YI8 300 aaPredicted RBP16.61■□□□□ 0.25
SCLT1-204ENST00000503215 AOPEPQ8N6M6 819 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 SAP25Q8TEE9 199 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 FAM172AQ8WUF8 416 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 KDM4CQ9H3R0 1056 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 TMEM63CQ9P1W3 806 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 PPARGC1AQ9UBK2 798 aaKnown RBP16.61■□□□□ 0.25
SCLT1-204ENST00000503215 DNAI1Q9UI46 699 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 FCF1Q9Y324 198 aaKnown RBP16.61■□□□□ 0.25
SCLT1-204ENST00000503215 WASF2Q9Y6W5 498 aa16.61■□□□□ 0.25
SCLT1-204ENST00000503215 FREM2Q5SZK8 3169 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 A0A1W2PQU0 124 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 TCRBV5S1A1TA0A578 114 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 SRRM3A6NNA2 597 aaPredicted RBP16.6■□□□□ 0.25
SCLT1-204ENST00000503215 SLC31A1O15431 190 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 RNGTTO60942 597 aaKnown RBP16.6■□□□□ 0.25
SCLT1-204ENST00000503215 LEFTY1O75610 366 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 LRIG2O94898 1065 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 PLEKP08567 350 aaPredicted RBP16.6■□□□□ 0.25
SCLT1-204ENST00000503215 KRT3P12035 628 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 GKP32189 559 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 PTPN9P43378 593 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 NSFP46459 744 aaKnown RBP16.6■□□□□ 0.25
SCLT1-204ENST00000503215 SERPINH1P50454 418 aaKnown RBP16.6■□□□□ 0.25
SCLT1-204ENST00000503215 DNA2P51530 1060 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 TYRO3Q06418 890 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 C1QBPQ07021 282 aaKnown RBP16.6■□□□□ 0.25
SCLT1-204ENST00000503215 SCAPQ12770 1279 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 CCDC183Q5T5S1 534 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 MON1BQ7L1V2 547 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 PYROXD2Q8N2H3 581 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 MFSD2AQ8NA29 543 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 TMIEQ8NEW7 156 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 AGPAT1Q99943 283 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 OSBPL2Q9H1P3 480 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 FZD3Q9NPG1 666 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 GDF3Q9NR23 364 aa16.6■□□□□ 0.25
SCLT1-204ENST00000503215 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
SCLT1-204ENST00000503215 TP53BP1Q12888 1972 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-204ENST00000503215 ARID1BQ8NFD5 2236 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-204ENST00000503215 FAM149AA5PLN7 773 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 TNFSF14O43557 240 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 CLCN6P51797 869 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 RPL7AP62424 266 aaKnown RBP16.59■□□□□ 0.25
SCLT1-204ENST00000503215 NRG1Q02297 640 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-204ENST00000503215 ZNF284Q2VY69 593 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 ACBD5Q5T8D3 534 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-204ENST00000503215 SEL1L3Q68CR1 1132 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 ZNF783Q6ZMS7 281 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 STRADAQ7RTN6 431 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 DNAAF5Q86Y56 855 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 NETO2Q8NC67 525 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 VOPP1Q96AW1 172 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 TMEM51Q9NW97 253 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 TAS2R14Q9NYV8 317 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 IL36AQ9UHA7 158 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 ZFR2Q9UPR6 939 aaKnown RBP16.59■□□□□ 0.25
SCLT1-204ENST00000503215 FARP1Q9Y4F1 1045 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-204ENST00000503215 PTPRBP23467 1997 aa16.59■□□□□ 0.25
SCLT1-204ENST00000503215 TMEM8BA6NDV4 472 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 SIGLEC16A6NMB1 481 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 DFNA5O60443 496 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 PRNPP04156 253 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 ITGAVP06756 1048 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 RHOQP17081 205 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 GPD1P21695 349 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 CLDN6P56747 220 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 GSCP56915 257 aaPredicted RBP16.58■□□□□ 0.24
SCLT1-204ENST00000503215 DNAJC3Q13217 504 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 RETSATQ6NUM9 610 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 ERN2Q76MJ5 926 aaKnown RBP16.58■□□□□ 0.24
SCLT1-204ENST00000503215 TMPRSS7Q7RTY8 843 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 KANSL1Q7Z3B3 1105 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 IRF2BP2Q7Z5L9 587 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 EID2Q8N6I1 236 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 TMEM145Q8NBT3 493 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 OR6K2Q8NGY2 324 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 ARHGEF2Q92974 986 aaKnown RBP16.58■□□□□ 0.24
SCLT1-204ENST00000503215 SELENOOQ9BVL4 669 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 TM6SF2Q9BZW4 377 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 NOL6Q9H6R4 1146 aaKnown RBP16.58■□□□□ 0.24
SCLT1-204ENST00000503215 PREBQ9HCU5 417 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.24
SCLT1-204ENST00000503215 PKD1L2Q7Z442 2459 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms