RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 POU6F1Q14863 301 aa18.92■□□□□ 0.62
SCARB2-203ENST00000502908 KIAA0319Q5VV43 1072 aa18.92■□□□□ 0.62
SCARB2-203ENST00000502908 METTL21CQ5VZV1 264 aa18.92■□□□□ 0.62
SCARB2-203ENST00000502908 CLEC20AQ6ZU45 233 aa18.92■□□□□ 0.62
SCARB2-203ENST00000502908 TMEM40Q8WWA1 233 aa18.92■□□□□ 0.62
SCARB2-203ENST00000502908 PRPF18Q99633 342 aaKnown RBP18.92■□□□□ 0.62
SCARB2-203ENST00000502908 SEMA6AQ9H2E6 1030 aa18.92■□□□□ 0.62
SCARB2-203ENST00000502908 RIMS3Q9UJD0 308 aa18.92■□□□□ 0.62
SCARB2-203ENST00000502908 UBQLN1Q9UMX0 589 aaKnown RBP18.92■□□□□ 0.62
SCARB2-203ENST00000502908 TIMM13Q9Y5L4 95 aaPredicted RBP18.92■□□□□ 0.62
SCARB2-203ENST00000502908 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
SCARB2-203ENST00000502908 KLHL33A6NCF5 533 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NEMP2A6NFY4 417 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 TIMM44O43615 452 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 HUS1O60921 280 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 MT-CYBP00156 380 aaPredicted RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 SRGAP2BP0DMP2 458 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NCAM1P13591 858 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NPR3P17342 541 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 HDCP19113 662 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ART3Q13508 389 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ADGRE1Q14246 886 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 RARS2Q5T160 578 aaKnown RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ALKAL1Q6UXT8 129 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ZYG11AQ6WRX3 759 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ARHGAP36Q6ZRI8 547 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ZC3HC1Q86WB0 502 aaKnown RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 CEP97Q8IW35 865 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 CENPLQ8N0S6 344 aaPredicted RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 PCDH20Q8N6Y1 951 aaKnown RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NT5C3BQ969T7 300 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 BTBD9Q96Q07 612 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 SERPINI1Q99574 410 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 CCDC28BQ9BUN5 200 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ADAMTS10Q9H324 1103 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 DDIT4Q9NX09 232 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 C6orf203Q9P0P8 240 aaPredicted RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 GNEQ9Y223 722 aaKnown RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 CDYLQ9Y232 598 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ASB14A6NK59 587 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 CLPTM1O96005 669 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 AHSGP02765 367 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 USP17L7P0C7H9 530 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 HNRNPLP14866 589 aaKnown RBP eCLIP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NELFEP18615 380 aaKnown RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 SCNN1AP37088 669 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 MYBPC1Q00872 1141 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 ANO4Q32M45 955 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NADK2Q4G0N4 442 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 WSCD1Q658N2 575 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NOTUMQ6P988 496 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 GK5Q6ZS86 529 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 MFSD6LQ8IWD5 586 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 NXNL1Q96CM4 212 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 GBA3Q9H227 469 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 WDR6Q9NNW5 1121 aaKnown RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 TMEM30AQ9NV96 361 aa18.91■□□□□ 0.62
SCARB2-203ENST00000502908 COPG1Q9Y678 874 aaKnown RBP18.91■□□□□ 0.62
SCARB2-203ENST00000502908 PEX1O43933 1283 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 DLX3O60479 287 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 PIM1P11309 404 aaPredicted RBP18.9■□□□□ 0.62
SCARB2-203ENST00000502908 FGFR3P22607 806 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 TAF6P49848 677 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 PPIDQ08752 370 aaKnown RBP18.9■□□□□ 0.62
SCARB2-203ENST00000502908 NRF1Q16656 503 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 ARRDC4Q8NCT1 418 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 RP9Q8TA86 221 aaKnown RBP18.9■□□□□ 0.62
SCARB2-203ENST00000502908 RNF217Q8TC41 542 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 PRICKLE1Q96MT3 831 aaPredicted RBP18.9■□□□□ 0.62
SCARB2-203ENST00000502908 RHOBTB2Q9BYZ6 727 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 DDX18Q9NVP1 670 aaKnown RBP18.9■□□□□ 0.62
SCARB2-203ENST00000502908 DERAQ9Y315 318 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 VILLO15195 856 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 DDNO94850 711 aaPredicted RBP18.9■□□□□ 0.62
SCARB2-203ENST00000502908 CSPG5O95196 566 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 MARVELD2Q8N4S9 558 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 PCDHAC1Q9H158 963 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 ADA2Q9NZK5 511 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 PRPF19Q9UMS4 504 aaKnown RBP18.9■□□□□ 0.62
SCARB2-203ENST00000502908 TLL2Q9Y6L7 1015 aa18.9■□□□□ 0.62
SCARB2-203ENST00000502908 GPR32O75388 356 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.62
SCARB2-203ENST00000502908 LILRA4P59901 499 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 NSUN2Q08J23 767 aaKnown RBP eCLIP18.89■□□□□ 0.62
SCARB2-203ENST00000502908 B4GALNT2Q8NHY0 566 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 CNDP1Q96KN2 507 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 TNIP3Q96KP6 325 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 TSNARE1Q96NA8 513 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 GPR22Q99680 433 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 MCMBPQ9BTE3 642 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 ATXN3LQ9H3M9 355 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 SLC2A6Q9UGQ3 507 aa18.89■□□□□ 0.62
SCARB2-203ENST00000502908 BRCA2P51587 3418 aa18.89■□□□□ 0.61
SCARB2-203ENST00000502908 KCNU1A8MYU2 1149 aa18.89■□□□□ 0.61
SCARB2-203ENST00000502908 VAPBO95292 243 aa18.89■□□□□ 0.61
SCARB2-203ENST00000502908 PGK1P00558 417 aa18.89■□□□□ 0.61
SCARB2-203ENST00000502908 SH2D4BQ5SQS7 431 aa18.89■□□□□ 0.61
SCARB2-203ENST00000502908 TSTD2Q5T7W7 516 aa18.89■□□□□ 0.61
SCARB2-203ENST00000502908 LRRC8EQ6NSJ5 796 aa18.89■□□□□ 0.61
SCARB2-203ENST00000502908 ARHGAP22Q7Z5H3 698 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms