RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 PLD4Q96BZ4 506 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 FCRL3Q96P31 734 aaPredicted RBP7.45□□□□□ -1.22
CPNE4-202ENST00000502818 XPO6Q96QU8 1125 aaKnown RBP7.45□□□□□ -1.22
CPNE4-202ENST00000502818 APOL5Q9BWW9 433 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 FOXP3Q9BZS1 431 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 KIF9Q9HAQ2 790 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 NT5MQ9NPB1 228 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 CFAP97Q9P2B7 532 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 RAD54BQ9Y620 910 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 MAD1L1Q9Y6D9 718 aa7.45□□□□□ -1.22
CPNE4-202ENST00000502818 MYO9BQ13459 2157 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 EYSQ5T1H1 3165 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 A0A1W2PPM1 405 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 GFRA2O00451 464 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 NCAM2O15394 837 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 SNAP91O60641 907 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 PRAMEF12O95522 483 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 AP2A1O95782 977 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 CKMP06732 381 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 MMP2P08253 660 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 MZF1P28698 734 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-202ENST00000502818 SLC11A2P49281 568 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 EIF3BP55884 814 aaKnown RBP7.44□□□□□ -1.22
CPNE4-202ENST00000502818 IRX1P78414 480 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-202ENST00000502818 GUCY1A3Q02108 690 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 SERINC3Q13530 473 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 MPP2Q14168 576 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 POLD3Q15054 466 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-202ENST00000502818 KBTBD12Q3ZCT8 623 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 ADGRF1Q5T601 910 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 DENND5AQ6IQ26 1287 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 LINGO4Q6UY18 593 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 GRASPQ7Z6J2 395 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-202ENST00000502818 ITIH5Q86UX2 942 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 EXOC3L1Q86VI1 746 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 PALM2Q8IXS6 379 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 PNPLA1Q8N8W4 532 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 MAML1Q92585 1016 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 ZNF707Q96C28 371 aaPredicted RBP7.44□□□□□ -1.22
CPNE4-202ENST00000502818 ZNF778Q96MU6 729 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 SMIM14Q96QK8 99 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 TGS1Q96RS0 853 aaKnown RBP7.44□□□□□ -1.22
CPNE4-202ENST00000502818 SPON2Q9BUD6 331 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 TMEM109Q9BVC6 243 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 EPN3Q9H201 632 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 GLOD4Q9HC38 313 aa7.44□□□□□ -1.22
CPNE4-202ENST00000502818 EXOC1LA0A1B0GW35 172 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 LEFTY2O00292 366 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 RGS16O15492 202 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CACNG3O60359 315 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 RAMP2O60895 175 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 TBL1XO60907 577 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 PMPCBO75439 489 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 STK10O94804 968 aaKnown RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CD160O95971 181 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 ABHD2P08910 425 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 NR1D1P20393 614 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 HTR7P34969 479 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 KPNA1P52294 538 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 NDST2P52849 883 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 ERVK-21P61565 698 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CREMQ03060 361 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 GNA12Q03113 381 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 PTPRRQ15256 657 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 TMED2Q15363 201 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 PCSK7Q16549 785 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 GPR158Q5T848 1215 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 AGBL2Q5U5Z8 902 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 LRRC8BQ6P9F7 803 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 KDM7AQ6ZMT4 941 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 TPGS1Q6ZTW0 290 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CCDC149Q6ZUS6 474 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 LZTR1Q8N653 840 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 IPMKQ8NFU5 416 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 ITFG1Q8TB96 612 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 MYLIPQ8WY64 445 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 LRRC3BQ96PB8 259 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CDK5RAP1Q96SZ6 601 aaKnown RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 KLF6Q99612 283 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 EBNA1BP2Q99848 306 aaKnown RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 LINC00597Q9H2U6 94 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 C12orf65Q9H3J6 166 aaKnown RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 ACTR5Q9H9F9 607 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 PDFQ9HBH1 243 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 ASAH2Q9NR71 780 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 UXTQ9UBK9 157 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 ZC3H7BQ9UGR2 993 aaKnown RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 SSX2IPQ9Y2D8 614 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CCDC195A0A1B0GUA6 201 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 HMGB1P1B2RPK0 211 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 ATP9BO43861 1147 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 PRAMEF11O60813 436 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 SUN1O94901 812 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 PRKCGP05129 697 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CEBPBP17676 345 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 CD86P42081 329 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 NRIP1P48552 1158 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 PRSS36Q5K4E3 855 aa7.43□□□□□ -1.22
CPNE4-202ENST00000502818 RNF219Q5W0B1 726 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-202ENST00000502818 APCDD1Q8J025 514 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms