RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 KLHL41O60662 606 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 BCAS2O75934 225 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PNPP00491 289 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 IFNB1P01574 187 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 INHBAP08476 426 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCDC159P0C7I6 412 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 SFTPCP11686 197 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PEPDP12955 493 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 FERP16591 822 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ITGB5P18084 799 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 IGFBP6P24592 240 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 TNFRSF8P28908 595 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 HOXC8P31273 242 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC5A2P31639 672 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC6A4P31645 630 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 IL15P40933 162 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 KIR2DL3P43628 341 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 NPY4RP50391 375 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 NPEPPSP55786 919 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 MXRA7P84157 204 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 HTD2P86397 168 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 TBL3Q12788 808 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 GPS1Q13098 491 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 FHL3Q13643 280 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ITGA7Q13683 1181 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 RRS1Q15050 365 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 OASLQ15646 514 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ALG11Q2TAA5 492 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF750Q32MQ0 723 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PABPC1LQ4VXU2 614 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF766Q5HY98 468 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 GLRA4Q5JXX5 417 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 AGBL4Q5VU57 503 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 CACHD1Q5VU97 1274 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 WDR93Q6P2C0 686 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZCCHC12Q6PEW1 402 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 C16orf87Q6PH81 154 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 Q6ZUG5 572 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 UBE3BQ7Z3V4 1068 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 RABEPKQ7Z6M1 372 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 MON1AQ86VX9 555 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 NBPF5PQ86XG9 351 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PLXDC1Q8IUK5 500 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM217AQ8IXS0 508 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 SYCP3Q8IZU3 236 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 SIX6OS1Q8N1H7 587 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 IL17RCQ8NAC3 791 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM46DQ8NEK8 389 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 NUDT10Q8NFP7 164 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 CASKIN2Q8WXE0 1202 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZCCHC14Q8WYQ9 949 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 CHFRQ96EP1 664 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 NUDT11Q96G61 164 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 COG3Q96JB2 828 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 NLRP4Q96MN2 994 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PWWP2AQ96N64 755 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PPP1R10Q96QC0 940 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 SPXQ9BT56 116 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 TUBB6Q9BUF5 446 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 REXO4Q9GZR2 422 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCDC134Q9H6E4 229 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 POLR1BQ9H9Y6 1135 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 XPNPEP3Q9NQH7 507 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PFDN4Q9NQP4 134 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 LIN7CQ9NUP9 197 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 MRPS18AQ9NVS2 196 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ING3Q9NXR8 418 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 TAS2R3Q9NYW6 316 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 CFAP97Q9P2B7 532 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZDHHC9Q9Y397 364 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ADAM18Q9Y3Q7 739 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PCDHB7Q9Y5E2 793 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PCDHA10Q9Y5I2 948 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 NUP188Q5SRE5 1749 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ATP8B3O60423 1300 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 NHSQ6T4R5 1651 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ADAMTS7Q9UKP4 1686 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ARHGEF37A1IGU5 675 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 LRRD1A4D1F6 860 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 TCAF2A6NFQ2 919 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 GLOD5A6NK44 160 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 KIAA0391O15091 583 aaKnown RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 CYP27B1O15528 508 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SEPT4O43236 478 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 TLR2O60603 784 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC43A1O75387 559 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 HEXIM1O94992 359 aaKnown RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 RASAL1O95294 804 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 VSIG10L2P0DP72 767 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 PDHBP11177 359 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 TNNT1P13805 278 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF28P17035 718 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 TTKP33981 857 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 PRKCIP41743 596 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 RABIFP47224 123 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ALDH1A3P47895 512 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms