RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TMCO4Q5TGY1 634 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 TMEM154Q6P9G4 183 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 PGM2L1Q6PCE3 622 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CD300LGQ6UXG3 332 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 LRRTM3Q86VH5 581 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 DEFB107AQ8IZN7 70 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 EFCAB3Q8N7B9 438 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 C2orf69Q8N8R5 385 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 IPMKQ8NFU5 416 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ACTRT2Q8TDY3 377 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 PYDC1Q8WXC3 89 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CCDC124Q96CT7 223 aaKnown RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 CMTM5Q96DZ9 223 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 TSGA13Q96PP4 275 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 TBL1YQ9BQ87 522 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 OSBPL2Q9H1P3 480 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 DMAP1Q9NPF5 467 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-204ENST00000501271 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 ARHGEF38Q9NXL2 777 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 GIT1Q9Y2X7 761 aa10.02□□□□□ -0.81
CLIP1-204ENST00000501271 GOLGA8QA0A0J9YX86 632 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 GOLGA8OA6NCC3 632 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 GOLGA8NF8WBI6 632 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 IRAK2O43187 625 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 MSI1O43347 362 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 MGEA5O60502 916 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 B3GAT3O94766 335 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 IGHA2P01877 340 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 AHSGP02765 367 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 COX4I1P13073 169 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 RPL9P32969 192 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 PSEN1P49768 467 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 KLF10Q13118 480 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 CCNIQ14094 377 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 USP10Q14694 798 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ZRSR2Q15696 482 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 DENND5AQ6IQ26 1287 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 CXCL17Q6UXB2 119 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 IZUMO2Q6UXV1 221 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ZYG11AQ6WRX3 759 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 RNF111Q6ZNA4 994 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 LINC00523Q86TU6 105 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 SLC41A1Q8IVJ1 513 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 MFSD6LQ8IWD5 586 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 DENND6AQ8IWF6 608 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 CENPLQ8N0S6 344 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ATPAF2Q8N5M1 289 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 TRPV1Q8NER1 839 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 KCTD4Q8WVF5 259 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 PPP1R36Q96LQ0 422 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ACBD6Q9BR61 282 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 FTHL17Q9BXU8 183 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 WDR55Q9H6Y2 383 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 S100A14Q9HCY8 104 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 DNAJB4Q9UDY4 337 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 NEMP1O14524 444 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 BUD23O43709 281 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 MAFKO60675 156 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 FKBP6O75344 327 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 H2AFYO75367 372 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 GLDCP23378 1020 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 SP100P23497 879 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 CCNCP24863 283 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ARNTP27540 789 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 GRIA4P48058 902 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 NUMBP49757 651 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 COG7P83436 770 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ZNF33AQ06730 810 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 CTBP1Q13363 440 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 LIPMQ5VYY2 423 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 PKN3Q6P5Z2 889 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 SREK1Q8WXA9 508 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 FICDQ9BVA6 458 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 SLC39A8Q9C0K1 460 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 DRC3Q9H069 523 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ILKAPQ9H0C8 392 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 TCF7L2Q9NQB0 619 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 CHST12Q9NRB3 414 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 DLGAP2Q9P1A6 1054 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 SLC2A6Q9UGQ3 507 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 SFMBT1Q9UHJ3 866 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 TLK1Q9UKI8 766 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 ANKRD6Q9Y2G4 727 aa10.01□□□□□ -0.81
CLIP1-204ENST00000501271 AAR2Q9Y312 384 aaKnown RBP10.01□□□□□ -0.81
CLIP1-204ENST00000501271 F8W810 466 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 MATN2O00339 956 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 MAP3K13O43283 966 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 PAGE1O75459 146 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 NEBLO76041 1014 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 VAPBO95292 243 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 PGK1P00558 417 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 CYP11A1P05108 521 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 HLA-DQB2P05538 268 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 ITGB1P05556 798 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 APOA4P06727 396 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 AKR1A1P14550 325 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 PRDX6P30041 224 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 HADHAP40939 763 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 RGS2P41220 211 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 ARCN1P48444 511 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms