RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SLC36A4Q6YBV0 504 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 ARHGAP36Q6ZRI8 547 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 DSG4Q86SJ6 1040 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 FAM124AQ86V42 546 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 PCDH20Q8N6Y1 951 aaKnown RBP17.08■□□□□ 0.32
PRKCB-210ENST00000498739 OR2A12Q8NGT7 310 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 GANCQ8TET4 914 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.32
PRKCB-210ENST00000498739 FAF2Q96CS3 445 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 ZC3H10Q96K80 434 aaKnown RBP17.08■□□□□ 0.32
PRKCB-210ENST00000498739 TM6SF2Q9BZW4 377 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 PABPC3Q9H361 631 aaKnown RBP17.08■□□□□ 0.32
PRKCB-210ENST00000498739 PDFQ9HBH1 243 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 UBA2Q9UBT2 640 aaPredicted RBP17.08■□□□□ 0.32
PRKCB-210ENST00000498739 SCML1Q9UN30 329 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 MFSD11O43934 449 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 PRAMEF11O60813 436 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 ZNF821O75541 412 aaPredicted RBP17.07■□□□□ 0.32
PRKCB-210ENST00000498739 TMCC1O94876 653 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 ADH1BP00325 375 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 C7P10643 843 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 CD6P30203 668 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 SLC8A1P32418 973 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 RPL6Q02878 288 aaKnown RBP17.07■□□□□ 0.32
PRKCB-210ENST00000498739 CARD16Q5EG05 197 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 PMS2CLQ68D20 193 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 LAIR1Q6GTX8 287 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 DPY19L3Q6ZPD9 716 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 RYBPQ8N488 228 aaPredicted RBP17.07■□□□□ 0.32
PRKCB-210ENST00000498739 CHST14Q8NCH0 376 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 CASKIN2Q8WXE0 1202 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 ISG20Q96AZ6 181 aaKnown RBP17.07■□□□□ 0.32
PRKCB-210ENST00000498739 TOE1Q96GM8 510 aaKnown RBP17.07■□□□□ 0.32
PRKCB-210ENST00000498739 NCDNQ9UBB6 729 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 IPO11Q9UI26 975 aaKnown RBP17.07■□□□□ 0.32
PRKCB-210ENST00000498739 NCKAP1Q9Y2A7 1128 aa17.07■□□□□ 0.32
PRKCB-210ENST00000498739 NYNRINQ9P2P1 1898 aaKnown RBP17.07■□□□□ 0.32
PRKCB-210ENST00000498739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 A0A1W2PP55 124 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 C3orf70A6NLC5 250 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 C1QTNF3-AMACRE9PGA6 284 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 GFRA3O60609 400 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 NDUFS2O75306 463 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 RNASEH2AO75792 299 aaKnown RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 IGLV3-19P01714 112 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 C5AR1P21730 350 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 OXTRP30559 389 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 CHRNA3P32297 505 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 MARCKSL1P49006 195 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 DHPSP49366 369 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 CCNHP51946 323 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 RHOAP61586 193 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 IL10RBQ08334 325 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 SFSWAPQ12872 951 aaKnown RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 GSE1Q14687 1217 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 PAFAH1B3Q15102 231 aaKnown RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 POM121L1PQ3SYA9 428 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 INO80DQ53TQ3 878 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 FAM46CQ5VWP2 391 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 ARMCX6Q7L4S7 300 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 LPCAT2Q7L5N7 544 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 TMEFF1Q8IYR6 380 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 ATPAF2Q8N5M1 289 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 DEFB119Q8N690 84 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 PQLC3Q8N755 202 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 PIP4K2CQ8TBX8 421 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 KIAA1524Q8TCG1 905 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 GRIN3AQ8TCU5 1115 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 RNF157Q96PX1 679 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 OMDQ99983 421 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 HINFPQ9BQA5 517 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 MAK16Q9BXY0 300 aaKnown RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 TSGA10Q9BZW7 698 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 FBXL12Q9NXK8 326 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 WSB2Q9NYS7 404 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 IL36AQ9UHA7 158 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 GMEB2Q9UKD1 530 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 SARDHQ9UL12 918 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 PPM1HQ9ULR3 514 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKCB-210ENST00000498739 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
PRKCB-210ENST00000498739 GRID2IPA4D2P6 1211 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 ZNF487B1APH4 448 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 KRT86O43790 486 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 MAP3K6O95382 1288 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 GSRP00390 522 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 PRNPP04156 253 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 PTMAP06454 111 aaKnown RBP17.05■□□□□ 0.32
PRKCB-210ENST00000498739 CTSLP07711 333 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 CCDC175P0C221 793 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 METAP1P53582 386 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 SNRPD1P62314 119 aaKnown RBP17.05■□□□□ 0.32
PRKCB-210ENST00000498739 CYTH1Q15438 398 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 MFSD7Q6UXD7 560 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 USP30Q70CQ3 517 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 VSIG1Q86XK7 387 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 RFX6Q8HWS3 928 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 HDDC3Q8N4P3 179 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 AADATQ8N5Z0 425 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms