RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 EBF2Q9HAK2 575 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 GPATCH2LQ9NWQ4 482 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 CAPN11Q9UMQ6 739 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 FCF1Q9Y324 198 aaKnown RBP18.78■□□□□ 0.6
HOXD11-202ENST00000498438 BZW2Q9Y6E2 419 aaKnown RBP18.78■□□□□ 0.6
HOXD11-202ENST00000498438 SCINQ9Y6U3 715 aa18.78■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3DA0A087WVF3 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3IA0A087WXS9 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3EA0A087X179 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3KA0A087X1G2 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3FA6NER0 549 aaPredicted RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3LB9A6J9 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 KPNA3O00505 521 aaPredicted RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 PLRG1O43660 514 aaKnown RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 CER1O95813 267 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 CD160O95971 181 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3HP0C7X1 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 MYBL1P10243 752 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 CEACAM1P13688 526 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 CD59P13987 128 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 RECQLP46063 649 aaPredicted RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 POLD3Q15054 466 aaPredicted RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3GQ6DHY5 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3CQ6IPX1 549 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 IL27RAQ6UWB1 636 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TBC1D3Q8IZP1 549 aaPredicted RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 ARFGAP1Q8N6T3 406 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 PCDH20Q8N6Y1 951 aaKnown RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TMIEQ8NEW7 156 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 SLC6A18Q96N87 628 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 XPO4Q9C0E2 1151 aaKnown RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 ISCUQ9H1K1 167 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 SLC32A1Q9H598 525 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 GAREM1Q9H706 876 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 IL21RQ9HBE5 538 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 MYO1AQ9UBC5 1043 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 IL36AQ9UHA7 158 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 AP4E1Q9UPM8 1137 aa18.77■□□□□ 0.6
HOXD11-202ENST00000498438 LUC7L2Q9Y383 392 aaKnown RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 TPRP12270 2363 aaKnown RBP18.77■□□□□ 0.6
HOXD11-202ENST00000498438 CABIN1Q9Y6J0 2220 aa18.77■□□□□ 0.59
HOXD11-202ENST00000498438 CXorf51AA0A1B0GTR3 108 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 RNF103O00237 685 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 PRNPP04156 253 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 SERPING1P05155 500 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 DNA2P51530 1060 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 RACK1P63244 317 aaKnown RBP18.76■□□□□ 0.59
HOXD11-202ENST00000498438 SLC14A1Q13336 389 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 KIF19Q2TAC6 998 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 HLA-BQ31612 363 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 PIP5KL1Q5T9C9 394 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 ADAT2Q7Z6V5 191 aaKnown RBP18.76■□□□□ 0.59
HOXD11-202ENST00000498438 VPS36Q86VN1 386 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 ZNF354CQ86Y25 554 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 FNIP1Q8TF40 1166 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 ARRDC3Q96B67 414 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 PEBP4Q96S96 227 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 KDM4CQ9H3R0 1056 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 TSPY26PQ9H489 355 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 NOL6Q9H6R4 1146 aaKnown RBP18.76■□□□□ 0.59
HOXD11-202ENST00000498438 PCSK1NQ9UHG2 260 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 HPCAL4Q9UM19 191 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 ANKRD6Q9Y2G4 727 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 FNDC3AQ9Y2H6 1198 aaKnown RBP18.76■□□□□ 0.59
HOXD11-202ENST00000498438 DOCK9Q9BZ29 2069 aa18.76■□□□□ 0.59
HOXD11-202ENST00000498438 LEFTY1O75610 366 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 TPM3P06753 285 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 CASP14P31944 242 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 GEMIN4P57678 1058 aaKnown RBP18.75■□□□□ 0.59
HOXD11-202ENST00000498438 TPI1P60174 286 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 CA9Q16790 459 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 CARD16Q5EG05 197 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 ARSIQ5FYB1 569 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 KCNT1Q5JUK3 1230 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 LEKR1Q6ZMV7 388 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 SNRNP25Q9BV90 132 aaKnown RBP18.75■□□□□ 0.59
HOXD11-202ENST00000498438 TM6SF2Q9BZW4 377 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 DHX35Q9H5Z1 703 aaKnown RBP18.75■□□□□ 0.59
HOXD11-202ENST00000498438 CATSPERBQ9H7T0 1116 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 MRPL47Q9HD33 250 aaKnown RBP18.75■□□□□ 0.59
HOXD11-202ENST00000498438 DYRK4Q9NR20 520 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 TPX2Q9ULW0 747 aaKnown RBP18.75■□□□□ 0.59
HOXD11-202ENST00000498438 SNX11Q9Y5W9 270 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 WASF2Q9Y6W5 498 aa18.75■□□□□ 0.59
HOXD11-202ENST00000498438 ACACBO00763 2458 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 WASH4PA8MWX3 477 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 FGF10O15520 208 aaPredicted RBP18.74■□□□□ 0.59
HOXD11-202ENST00000498438 LATO43561 262 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 KDELR3O43731 214 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 RNF8O76064 485 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 PMLP29590 882 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 MIPP30301 263 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 MAT2AP31153 395 aaKnown RBP18.74■□□□□ 0.59
HOXD11-202ENST00000498438 HTR7P34969 479 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 CCNHP51946 323 aaPredicted RBP18.74■□□□□ 0.59
HOXD11-202ENST00000498438 TAS2R38P59533 333 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 ERMARDQ5T6L9 678 aa18.74■□□□□ 0.59
HOXD11-202ENST00000498438 CYP4V2Q6ZWL3 525 aaPredicted RBP18.74■□□□□ 0.59
HOXD11-202ENST00000498438 TRIM69Q86WT6 500 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms