RNA–Protein interactions for RNA: ENST00000497586.5

SFMBT1-208, Transcript of Scm like with four mbt domains 1, human

TSL 4

Gene SFMBT1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFMBT1-208	ENST00000497586	TRIM62	Q9BVG3	475 aa		13.99	□□□□□ -0.17
SFMBT1-208	ENST00000497586	BOC	Q9BWV1	1114 aa		13.99	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SRRT	Q9BXP5	876 aa	Known RBP	13.99	□□□□□ -0.17
SFMBT1-208	ENST00000497586	VPS28	Q9UK41	221 aa		13.99	□□□□□ -0.17
SFMBT1-208	ENST00000497586	COQ4	Q9Y3A0	265 aa		13.99	□□□□□ -0.17
SFMBT1-208	ENST00000497586	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.99	□□□□□ -0.17
SFMBT1-208	ENST00000497586	HS3ST3A1	Q9Y663	406 aa		13.99	□□□□□ -0.17
SFMBT1-208	ENST00000497586	ICE1	Q9Y2F5	2266 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	POM121B	A6NF01	834 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	IGLV3-25	P01717	112 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	PRNP	P04156	253 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	EPB41	P11171	864 aa	Known RBP	13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	BRD2	P25440	801 aa	Known RBP	13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SLC5A2	P31639	672 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	CHRNA3	P32297	505 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	RABIF	P47224	123 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	CENPC	Q03188	943 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	TLE1	Q04724	770 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	CNGA2	Q16280	664 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	EDRF1	Q3B7T1	1238 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	C4orf17	Q53FE4	359 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SYPL2	Q5VXT5	272 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	KIAA1161	Q6NSJ0	714 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	TMEM270	Q6UE05	265 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	ERN2	Q76MJ5	926 aa	Known RBP	13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	C14orf80	Q86SX3	495 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SLC35F3	Q8IY50	421 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	TMIE	Q8NEW7	156 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	LMX1A	Q8TE12	382 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	GLMN	Q92990	594 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	CCDC47	Q96A33	483 aa	Known RBP	13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	FEM1A	Q9BSK4	669 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	HDAC8	Q9BY41	377 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SYNDIG1	Q9H7V2	258 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SEPT3	Q9UH03	358 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	MAPK8IP1	Q9UQF2	711 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	HS3ST2	Q9Y278	367 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	UNC13C	Q8NB66	2214 aa		13.98	□□□□□ -0.17
SFMBT1-208	ENST00000497586	KCNU1	A8MYU2	1149 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	NOBOX	O60393	691 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	KRT38	O76015	456 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	TRUB2	O95900	331 aa	Known RBP	13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	LIPC	P11150	499 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SRC	P12931	536 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	JUND	P17535	347 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	RPL34	P49207	117 aa	Known RBP	13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	RPS21	P63220	83 aa	Known RBP	13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SRSF6	Q13247	344 aa	Known RBP	13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	PDE1C	Q14123	709 aa	Predicted RBP	13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	TCERG1L	Q5VWI1	586 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	JAML	Q86YT9	394 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	FBXO39	Q8N4B4	442 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	OR52K2	Q8NGK3	314 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	OR2A12	Q8NGT7	310 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	BTN2A2	Q8WVV5	523 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	PPP1R16A	Q96I34	528 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	PSMG3-AS1	Q96PY0	264 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	CCDC3	Q9BQI4	270 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	ZSWIM1	Q9BR11	485 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	EPB41L5	Q9HCM4	733 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	USP25	Q9UHP3	1055 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SLC12A6	Q9UHW9	1150 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	KLF15	Q9UIH9	416 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	OR51B4	Q9Y5P0	310 aa		13.97	□□□□□ -0.17
SFMBT1-208	ENST00000497586	NTN3	O00634	580 aa	Predicted RBP	13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	CASC3	O15234	703 aa	Known RBP	13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	RAD51B	O15315	384 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	UGT1A5	P35504	534 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	NEK3	P51956	506 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	LRMP	Q12912	555 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	FGL2	Q14314	439 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	TGIF1	Q15583	401 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	FBXL22	Q6P050	247 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	RAB11FIP2	Q7L804	512 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	ZSCAN30	Q86W11	494 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	GRIN3A	Q8TCU5	1115 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	TBATA	Q96M53	351 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	RPRD1A	Q96P16	312 aa	Predicted RBP	13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SLC17A9	Q9BYT1	436 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	POPDC2	Q9HBU9	364 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	ST7	Q9NRC1	585 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	FOXD4L1	Q9NU39	408 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	SPAST	Q9UBP0	616 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	APOBEC3B	Q9UH17	382 aa	Known RBP	13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	IPO11	Q9UI26	975 aa	Known RBP	13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586	PCDHGA4	Q9Y5G9	962 aa		13.96	□□□□□ -0.17
SFMBT1-208	ENST00000497586		D6RAR5	112 aa		13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	CETN3	O15182	167 aa		13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	PRR29	P0C7W0	189 aa		13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	SLC2A3	P11169	496 aa		13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	PFKFB1	P16118	471 aa		13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	ACADSB	P45954	432 aa		13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	IRAK1	P51617	712 aa		13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	PITX1	P78337	314 aa	Predicted RBP	13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	EIF2B5	Q13144	721 aa	Known RBP	13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.95	□□□□□ -0.18
SFMBT1-208	ENST00000497586	TBR1	Q16650	682 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms