RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TAS2R50P59544 299 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 YPEL5P62699 121 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 BFSP2Q13515 415 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ACAP1Q15027 740 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 AASDHQ4L235 1098 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ANKRD20A4Q4UJ75 823 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ANKRD20A8PQ5CZ79 823 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ANKRD20A2Q5SQ80 823 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ARHGAP40Q5TG30 622 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ANKRD20A1Q5TYW2 823 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ANKRD20A3Q5VUR7 823 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 NAPEPLDQ6IQ20 393 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 RGS7BPQ6MZT1 257 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 C16orf89Q6UX73 402 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 CLEC17AQ6ZS10 378 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 STK32CQ86UX6 486 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 RTL3Q8N8U3 475 aaKnown RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 POC1BQ8TC44 478 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 SLX1AQ9BQ83 275 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 MGME1Q9BQP7 344 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 KIFC3Q9BVG8 833 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 SMOC2Q9H3U7 446 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 OSGEPL1Q9H4B0 414 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 DNAJC18Q9H819 358 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 NINJ2Q9NZG7 142 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 NCDNQ9UBB6 729 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 STEAP1Q9UHE8 339 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 SORCS3Q9UPU3 1222 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 PCDHA5Q9Y5H7 936 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 TSPOAP1O95153 1857 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 MAP3K4Q9Y6R4 1608 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NPIPB13A6NJU9 1138 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 ENO4A6NNW6 628 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 TBKBP1A7MCY6 615 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NPIPB5A8MRT5 1133 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NPIPB4C9JG80 1138 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 QSOX1O00391 747 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NOL3O60936 208 aaKnown RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 ITGB1P05556 798 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 GALTP07902 379 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 CHRM4P08173 479 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 INHBAP08476 426 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 FBLN1P23142 703 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 ADORA2AP29274 412 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 HOXA13P31271 388 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 IL13P35225 146 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 CAMPP49913 170 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 LUMP51884 338 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 PNLIPRP2P54317 469 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 TMEM62Q0P6H9 643 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 LMAN2Q12907 356 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 E2F2Q14209 437 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 ZNF273Q14593 569 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 LETM2Q2VYF4 491 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 SLC39A12Q504Y0 691 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 FBLN7Q53RD9 439 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 PRR23CQ6ZRP0 262 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 HOOK3Q86VS8 718 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 WDR63Q8IWG1 891 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 CNTN4Q8IWV2 1026 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 MMP21Q8N119 569 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 TC2NQ8N9U0 490 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 ATAD1Q8NBU5 361 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NSUN7Q8NE18 718 aaKnown RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 CEP76Q8TAP6 659 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 PSPC1Q8WXF1 523 aaKnown RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 TRMT61AQ96FX7 289 aaKnown RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 ERO1AQ96HE7 468 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NLRP4Q96MN2 994 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 GAD1Q99259 594 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NPLQ9BXD5 320 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 VN1R3Q9BXE9 311 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 WDR11Q9BZH6 1224 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 PCDH18Q9HCL0 1135 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 SLC22A11Q9NSA0 550 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 C20orf141Q9NUB4 165 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 ARHGEF38Q9NXL2 777 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 KCTD5Q9NXV2 234 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 NCKIPSDQ9NZQ3 722 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 VSX1Q9NZR4 365 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 CGNQ9P2M7 1197 aaKnown RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 HDAC6Q9UBN7 1215 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 KLQ9UEF7 1012 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 LAMP5Q9UJQ1 280 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 APPL1Q9UKG1 709 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 KCNK7Q9Y2U2 307 aa6.3□□□□□ -1.4
BRCA1-224ENST00000497488 COPG1Q9Y678 874 aaKnown RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 CDK13Q14004 1512 aaKnown RBP6.3□□□□□ -1.4
BRCA1-224ENST00000497488 LOC102723996A0A087X1L8 192 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FAM90A8PA6NJQ4 464 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 A6NL46 340 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 SLCO2B1O94956 709 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 PRSS23O95084 383 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 PENKP01210 267 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FAM90A13PP0C7W8 464 aa6.29□□□□□ -1.4
BRCA1-224ENST00000497488 FAM90A24PP0C7X0 464 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms