RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 NUP62P37198 522 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 MSH2P43246 934 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ME1P48163 572 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 DHPSP49366 369 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ATP12AP54707 1039 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 NLRP11P59045 1033 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 RNASE9P60153 205 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SRP54P61011 504 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 TAP2Q03519 686 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PRKCZQ05513 592 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ADAM9Q13443 819 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 LSAMPQ13449 338 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ARHGAP19Q14CB8 494 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZMYND11Q15326 602 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC39A12Q504Y0 691 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FNDC3BQ53EP0 1204 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKRD20A3Q5VUR7 823 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 KCTD16Q68DU8 428 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 DUS1LQ6P1R4 473 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 LIPIQ6XZB0 460 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ZC3H7AQ8IWR0 971 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 OR9A1PQ8NGU1 263 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 METTL6Q8TCB7 284 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SCFD1Q8WVM8 642 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 NCSTNQ92542 709 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 HDAC10Q969S8 669 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 RAD51AP1Q96B01 352 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SGF29Q96ES7 293 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 AK8Q96MA6 479 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 NUP88Q99567 741 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 SORBS1Q9BX66 1292 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FUT8Q9BYC5 575 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 KRTAP4-5Q9BYR2 181 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FRMD8P1Q9BZ68 369 aaPredicted RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CATSPERZQ9NTU4 200 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 NUDT15Q9NV35 164 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 FAIMQ9NVQ4 179 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 GID8Q9NWU2 228 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 ADPRHL2Q9NX46 363 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 TAS2R3Q9NYW6 316 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 LNPEPQ9UIQ6 1025 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 AP3M1Q9Y2T2 418 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 PMF1-BGLAPU3KQ54 211 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 VIRMAQ69YN4 1812 aaKnown RBP3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 CPDO75976 1380 aa3.18□□□□□ -1.9
SNRNP48-202ENST00000496946 USP19O94966 1318 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A087X0M5 115 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A088AWK7 358 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A0A6YYJ9 748 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A1B0GX30 115 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CAPN8A6NHC0 703 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM90A27PA6NNH2 459 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 FOXO6A8MYZ6 492 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SLCO1B7G3V0H7 640 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 H0YIN7 160 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ACOT7O00154 380 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 DDX3XO00571 662 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 IRAK2O43187 625 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 EFCAB14O75071 495 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PEX11AO75192 247 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 GMNNO75496 209 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 HRGP04196 525 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 IL6P05231 212 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TFPTP0C1Z6 253 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 FGFR1P11362 822 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT5P13647 590 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ITGAXP20702 1163 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 GALP22466 123 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ALDH4A1P30038 563 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 STARP49675 285 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 GATMP50440 423 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF143P52747 638 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 P2RX3P56373 397 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 GPX6P59796 221 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CEBPZQ03701 1054 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PPARAQ07869 468 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TFCP2Q12800 502 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MAP4K2Q12851 820 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MAP3K12Q12852 859 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MYO1EQ12965 1108 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 COASYQ13057 564 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CALCOCO2Q13137 446 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CAMK2DQ13557 499 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PLS1Q14651 629 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 EZH2Q15910 746 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MAPK6Q16659 721 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TIGD6Q17RP2 521 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TMEM266Q2M3C6 531 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ZACNQ401N2 412 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ZCWPW2Q504Y3 356 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 BTBD8Q5XKL5 378 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 DENND2CQ68D51 928 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC22A25Q6T423 547 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TEPPQ6URK8 271 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 B3GNT9Q6UX72 402 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ISLR2Q6UXK2 745 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PTCHD4Q6ZW05 846 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TMTC3Q6ZXV5 915 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LIMS2Q7Z4I7 341 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 KCTD20Q7Z5Y7 419 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms