RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 DNPEPQ9ULA0 475 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 BDP1A6H8Y1 2624 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 TMEM221A6NGB7 291 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 M0R296 226 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 NEBLO76041 1014 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 PEX11BO96011 259 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 NTSR1P30989 418 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 IL12RB1P42701 662 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 FZD5Q13467 585 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 ENPP2Q13822 863 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 DLG2Q15700 870 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 PRELID2Q8N945 189 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 RPLP0P6Q8NHW5 317 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 HTR3CQ8WXA8 447 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 ISG20Q96AZ6 181 aaKnown RBP22.15■■□□□ 1.14
C9orf3-222ENST00000496567 TMEM245Q9H330 911 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 SEPT3Q9UH03 358 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 SUN2Q9UH99 717 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 ACTL7AQ9Y615 435 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 STON1Q9Y6Q2 735 aa22.15■■□□□ 1.14
C9orf3-222ENST00000496567 SHROOM3Q8TF72 1996 aa22.14■■□□□ 1.14
C9orf3-222ENST00000496567 CFAP69A5D8W1 941 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 K7ERQ8 282 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 TMCC1O94876 653 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 CHRM1P11229 460 aaPredicted RBP22.14■■□□□ 1.13
C9orf3-222ENST00000496567 RBL1P28749 1068 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 IFI35P80217 286 aaPredicted RBP22.14■■□□□ 1.13
C9orf3-222ENST00000496567 ZNF235Q14590 738 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 DNTTIP2Q5QJE6 756 aaKnown RBP22.14■■□□□ 1.13
C9orf3-222ENST00000496567 B4GALNT4Q76KP1 1039 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 CCDC105Q8IYK2 499 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 TEX26Q8N6G2 289 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 ALLCQ8N6M5 410 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 PCDH20Q8N6Y1 951 aaKnown RBP22.14■■□□□ 1.13
C9orf3-222ENST00000496567 IL17RCQ8NAC3 791 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 CLDN23Q96B33 292 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 ACOX2Q99424 681 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 CINPQ9BW66 212 aaPredicted RBP22.14■■□□□ 1.13
C9orf3-222ENST00000496567 CACNA2D2Q9NY47 1150 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 SEPT10Q9P0V9 454 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 AMACRQ9UHK6 382 aa22.14■■□□□ 1.13
C9orf3-222ENST00000496567 FCF1Q9Y324 198 aaKnown RBP22.14■■□□□ 1.13
C9orf3-222ENST00000496567 ANTXRLA6NF34 631 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 TTC34A8MYJ7 566 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 KCNK1O00180 336 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 SMAD6O43541 496 aaKnown RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 ATG13O75143 517 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 KLF8O95600 359 aaPredicted RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 VAV1P15498 845 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 MMP13P45452 471 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 RPS9P46781 194 aaKnown RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 SLC10A7Q0GE19 358 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 SNX1Q13596 522 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 CYTH1Q15438 398 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 OASLQ15646 514 aaKnown RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 CYP1B1Q16678 543 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 C22orf39Q6P5X5 142 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 C12orf50Q8NA57 414 aaPredicted RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 FRS2Q8WU20 508 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 MAGOHBQ96A72 148 aaKnown RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 VAT1Q99536 393 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 GABRG3Q99928 467 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 ZDHHC4Q9NPG8 344 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 ZNF148Q9UQR1 794 aa22.13■■□□□ 1.13
C9orf3-222ENST00000496567 DRG1Q9Y295 367 aaKnown RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 MUC22E2RYF6 1773 aaPredicted RBP22.13■■□□□ 1.13
C9orf3-222ENST00000496567 EDDM13A0A1B0GTR0 161 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 CHURC1-FNTBB4DL54 471 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 TNFRSF10AO00220 468 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 STK10O94804 968 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 JCHAINP01591 159 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 ITGAVP06756 1048 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 STIP1P31948 543 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 HSPA9P38646 679 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 MAGEA9P43362 315 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 RHOAP61586 193 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 CKAP4Q07065 602 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 WHAMMP3Q1A5X7 153 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 HNRNPA1L2Q32P51 320 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 EOGTQ5NDL2 527 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 TXNDC5Q8NBS9 432 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 CCDC114Q96M63 670 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 PSKH2Q96QS6 385 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 IL12RB2Q99665 862 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 RBM22Q9NW64 420 aaKnown RBP eCLIP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 TARSL2A2RTX5 802 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 WASH3PC4AMC7 463 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 PDE2AO00408 941 aaPredicted RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 KCNN4O15554 427 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 SLC34A2O95436 690 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 EPHX1P07099 455 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 TEX44Q53QW1 395 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 TMEM121Q9BTD3 319 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 IER2Q9BTL4 223 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 C10orf88Q9H8K7 445 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 USP29Q9HBJ7 922 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 MMP17Q9ULZ9 603 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 MRFAP1Q9Y605 127 aa22.12■■□□□ 1.13
C9orf3-222ENST00000496567 MYO18AQ92614 2054 aaKnown RBP22.12■■□□□ 1.13
C9orf3-222ENST00000496567 TTC28Q96AY4 2481 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms