RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TRIM74Q86UV6 250 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 TRIM73Q86UV7 250 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 PRR26Q8N8Z3 221 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 CEP76Q8TAP6 659 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 ZNF333Q96JL9 665 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 APOLD1Q96LR9 279 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 TEFMQ96QE5 360 aaKnown RBP6.09□□□□□ -1.43
SF3B1-212ENST00000496458 FEM1BQ9UK73 627 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 DERAQ9Y315 318 aa6.09□□□□□ -1.43
SF3B1-212ENST00000496458 MST1RQ04912 1400 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 TARSL2A2RTX5 802 aaKnown RBP6.08□□□□□ -1.44
SF3B1-212ENST00000496458 DDTLA6NHG4 134 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-212ENST00000496458 OR6C75A6NL08 312 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 PMS2P54278 862 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 IL13RA2Q14627 380 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 ADCK5Q3MIX3 580 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 ZNF585BQ52M93 769 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 DNTTIP2Q5QJE6 756 aaKnown RBP6.08□□□□□ -1.44
SF3B1-212ENST00000496458 FNBP1LQ5T0N5 605 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 CRELD2Q6UXH1 353 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-212ENST00000496458 Q6ZSV7 163 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-212ENST00000496458 SUGP1Q8IWZ8 645 aaKnown RBP6.08□□□□□ -1.44
SF3B1-212ENST00000496458 TMEM57Q8N5G2 664 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 NEUROG1Q92886 237 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 CTDSP1Q9GZU7 261 aa6.08□□□□□ -1.44
SF3B1-212ENST00000496458 C17orf102A2RUQ5 167 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 MS4A18H0YCH9 400 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 GTPBP1O00178 669 aaKnown RBP6.07□□□□□ -1.44
SF3B1-212ENST00000496458 HSPB6O14558 160 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 RNMTO43148 476 aaKnown RBP6.07□□□□□ -1.44
SF3B1-212ENST00000496458 LIASO43766 372 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 PLA2G2AP14555 144 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 RFC1P35251 1148 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-212ENST00000496458 MTNR1AP48039 350 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 ZXDBP98169 803 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 SLC4A8Q2Y0W8 1093 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 GRAMD1BQ3KR37 738 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 ANKRD45Q5TZF3 282 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 ZNF367Q7RTV3 350 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 SERPINA11Q86U17 422 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 FTSJ3Q8IY81 847 aaKnown RBP6.07□□□□□ -1.44
SF3B1-212ENST00000496458 IQCF1Q8N6M8 205 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 CEP70Q8NHQ1 597 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 WDR26Q9H7D7 661 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 SEL1LQ9UBV2 794 aa6.07□□□□□ -1.44
SF3B1-212ENST00000496458 OR6C68A6NDL8 312 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 CLDN7O95471 211 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 MYZAPP0CAP1 466 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 GJC1P36383 396 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 DPP6P42658 865 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 PTPN9P43378 593 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 PCYT1AP49585 367 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 CDH12P55289 794 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 GOLGA8FQ08AF8 430 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 TBC1D9BQ66K14 1250 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 PDXDC1Q6P996 788 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 ANKRD44Q8N8A2 993 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 SPPL3Q8TCT6 385 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 NCSTNQ92542 709 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 PPP1R10Q96QC0 940 aaKnown RBP6.06□□□□□ -1.44
SF3B1-212ENST00000496458 CXorf56Q9H5V9 222 aa6.06□□□□□ -1.44
SF3B1-212ENST00000496458 RRP7AQ9Y3A4 280 aaKnown RBP6.06□□□□□ -1.44
SF3B1-212ENST00000496458 IRAK2O43187 625 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 LDB2O43679 373 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 SLC28A2O43868 658 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 HBP1O60381 514 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 ACAA1P09110 424 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-212ENST00000496458 HOXC6P09630 235 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 DHRS4L1P0CG22 281 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 TNNT1P13805 278 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 HOXD3P31249 432 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-212ENST00000496458 ABATP80404 500 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 ZNF284Q2VY69 593 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 CTXN3Q4LDR2 81 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 INO80DQ53TQ3 878 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-212ENST00000496458 FSCBQ5H9T9 825 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 CBWD5Q5RIA9 395 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 SH2D4BQ5SQS7 431 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 C2CD5Q86YS7 1000 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 ZDHHC23Q8IYP9 409 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 SLC35F5Q8WV83 523 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 TBC1D20Q96BZ9 403 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 RNFT2Q96EX2 444 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 MASTLQ96GX5 879 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 LHPPQ9H008 270 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 GRHL1Q9NZI5 618 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 NLKQ9UBE8 527 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 HDAC6Q9UBN7 1215 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 DNAJC16Q9Y2G8 782 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 LRP12Q9Y561 859 aa6.05□□□□□ -1.44
SF3B1-212ENST00000496458 VWA5AO00534 786 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 ENO3P13929 434 aaPredicted RBP6.04□□□□□ -1.44
SF3B1-212ENST00000496458 CD72P21854 359 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 YWHAQP27348 245 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 TNFRSF8P28908 595 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 THPOP40225 353 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 EGR4Q05215 589 aa6.04□□□□□ -1.44
SF3B1-212ENST00000496458 CRYZQ08257 329 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms