RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 DNASE2BQ8WZ79 361 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 PIGKQ92643 395 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 ISG20Q96AZ6 181 aaKnown RBP12.63□□□□□ -0.39
MRPL55-233ENST00000495899 ARHGEF26Q96DR7 871 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 HSPA12BQ96MM6 686 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 OMDQ99983 421 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 FBXL12Q9NXK8 326 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 CTTNBP2NLQ9P2B4 639 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 EVLQ9UI08 416 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-233ENST00000495899 INTUQ9ULD6 942 aa12.63□□□□□ -0.39
MRPL55-233ENST00000495899 C1QTNF3-AMACRE9PGA6 284 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 K7ERQ8 282 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 EEF2KO00418 725 aaKnown RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 MID1O15344 667 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 DAPK3O43293 454 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 SMAD6O43541 496 aaKnown RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 GLDCP23378 1020 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 ACSL1P33121 698 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 RECQLP46063 649 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 ARF5P84085 180 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 SF3A2Q15428 464 aaKnown RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 CCDC6Q16204 474 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 DPYSL2Q16555 572 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 CA9Q16790 459 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 DUOXA1Q1HG43 343 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 INO80DQ53TQ3 878 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 SLC23A3Q6PIS1 610 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 RFX8Q6ZV50 586 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 Q6ZVU0 165 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 ARMCX6Q7L4S7 300 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 FAM124AQ86V42 546 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 CACUL1Q86Y37 369 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 DEFB119Q8N690 84 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 PCDH20Q8N6Y1 951 aaKnown RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 ZNF564Q8TBZ8 553 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 GANCQ8TET4 914 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 FAM131CQ96AQ9 280 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 ZWILCHQ9H900 591 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 TMEM74BQ9NUR3 256 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 GPATCH2LQ9NWQ4 482 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 SUSD2Q9UGT4 822 aa12.62□□□□□ -0.39
MRPL55-233ENST00000495899 TPX2Q9ULW0 747 aaKnown RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.62□□□□□ -0.39
MRPL55-233ENST00000495899 EML5Q05BV3 1969 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 CKAP5Q14008 2032 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 RASA4BC9J798 803 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 SLC7A4O43246 635 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 RASA4O43374 803 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 ZNF821O75541 412 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 RNASEH2AO75792 299 aaKnown RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 PROSCO94903 275 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 SEMA4FO95754 770 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 CD160O95971 181 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 PRNPP04156 253 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 SERPINF2P08697 491 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 RARAP10276 462 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 GNSP15586 552 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 IL1R2P27930 398 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 CHRNA3P32297 505 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 ARL4AP40617 200 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 PSMD8P48556 350 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 LIMK1P53667 647 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 CCDC15Q0P6D6 951 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 SERINC3Q13530 473 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 HADHQ16836 314 aaKnown RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 AASDHQ4L235 1098 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 CARD16Q5EG05 197 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 PPP6R3Q5H9R7 873 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 RHOT2Q8IXI1 618 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 CCDC170Q8IYT3 715 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 HDDC3Q8N4P3 179 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 AADATQ8N5Z0 425 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 LZTR1Q8N653 840 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 NETO1Q8TDF5 533 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 PANX2Q96RD6 677 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 KCTD15Q96SI1 283 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 NUSAP1Q9BXS6 441 aaKnown RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 PACSIN1Q9BY11 444 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 NEUROG2Q9H2A3 272 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 LRRC19Q9H756 370 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 CWC15Q9P013 229 aaKnown RBP12.61□□□□□ -0.39
MRPL55-233ENST00000495899 SLC6A14Q9UN76 642 aa12.61□□□□□ -0.39
MRPL55-233ENST00000495899 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-233ENST00000495899 A0A1W2PP55 124 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 LRRC72A6NJI9 287 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 MEI4A8MW99 385 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 H3BRJ5 948 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 BUB1O43683 1085 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 MTA2O94776 668 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 LCA5LO95447 670 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 ERCC2P18074 760 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 MAN1A1P33908 653 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 ARHGAP25P42331 645 aa12.6□□□□□ -0.39
MRPL55-233ENST00000495899 SLC25A11Q02978 314 aaKnown RBP12.6□□□□□ -0.39
MRPL55-233ENST00000495899 DPYSQ14117 519 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms