RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 GPD1P21695 349 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 NSFP46459 744 aaKnown RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 CCT8P50990 548 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 TAS2R38P59533 333 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 TYRO3Q06418 890 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 STAT4Q14765 748 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 SHBQ15464 509 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ARL13BQ3SXY8 428 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ANO6Q4KMQ2 910 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 AGBL4Q5VU57 503 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 SCYL2Q6P3W7 929 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 TRIM72Q6ZMU5 477 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 DPY19L3Q6ZPD9 716 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ARCQ7LC44 396 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 APTXQ7Z2E3 356 aaKnown RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 DNAAF5Q86Y56 855 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 CCDC185Q8N715 623 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 FAM172AQ8WUF8 416 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ADAMTS14Q8WXS8 1223 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ERGIC2Q96RQ1 377 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ELF4Q99607 663 aaPredicted RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 MYOCQ99972 504 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 ZNF212Q9UDV6 495 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 RALYQ9UKM9 306 aaKnown RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 HS3ST2Q9Y278 367 aa9.81□□□□□ -0.84
MSH5-218ENST00000494646 FCF1Q9Y324 198 aaKnown RBP9.81□□□□□ -0.84
MSH5-218ENST00000494646 NBEAQ8NFP9 2946 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 MYLKQ15746 1914 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 A0A1W2PQU0 124 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 FAM221BA6H8Z2 402 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 SIGLEC16A6NMB1 481 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 C10orf142B7Z368 130 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 ALOX15BO15296 676 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 ZNF821O75541 412 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 LEFTY1O75610 366 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 ZMPSTE24O75844 475 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 PCDH8O95206 1070 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 CD160O95971 181 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 MBD3O95983 291 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 ITGAVP06756 1048 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 PLEKP08567 350 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 TNFAIP3P21580 790 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 GKP32189 559 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 RECQLP46063 649 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 HDAC4P56524 1084 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 ARF5P84085 180 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 GNA12Q03113 381 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 SLC20A2Q08357 652 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 CARD16Q5EG05 197 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 ACBD5Q5T8D3 534 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 PIP5KL1Q5T9C9 394 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 RETSATQ6NUM9 610 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 STRADAQ7RTN6 431 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 GLRX5Q86SX6 157 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 SPATS2Q86XZ4 545 aaKnown RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 PHF13Q86YI8 300 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 PYROXD2Q8N2H3 581 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 RYBPQ8N488 228 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 EID2Q8N6I1 236 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 DCAF4L2Q8NA75 395 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 NETO2Q8NC67 525 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 TMIEQ8NEW7 156 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 BAHD1Q8TBE0 780 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 GRIN3AQ8TCU5 1115 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 CENPIQ92674 756 aaPredicted RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 FAM131CQ96AQ9 280 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 CCDC114Q96M63 670 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 CDC6Q99741 560 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 OSBPL2Q9H1P3 480 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 CAAP1Q9H8G2 361 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 DYRK4Q9NR20 520 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 GDF3Q9NR23 364 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 TMEM51Q9NW97 253 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 TOR4AQ9NXH8 423 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 PPARGC1AQ9UBK2 798 aaKnown RBP9.8□□□□□ -0.84
MSH5-218ENST00000494646 IL36AQ9UHA7 158 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 DAAM1Q9Y4D1 1078 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 KNTC1P50748 2209 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 CHD6Q8TD26 2715 aa9.8□□□□□ -0.84
MSH5-218ENST00000494646 FREM2Q5SZK8 3169 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 SLC7A4O43246 635 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 CCP110O43303 1012 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 LATO43561 262 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 DFNA5O60443 496 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 LRIG2O94898 1065 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 PRNPP04156 253 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 CALB1P05937 261 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 PRLRP16471 622 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 RHOQP17081 205 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 GRK6P43250 576 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 PTPN9P43378 593 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 NXPH1P58417 271 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 RPL7AP62424 266 aaKnown RBP9.79□□□□□ -0.84
MSH5-218ENST00000494646 SLC45A4Q5BKX6 768 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 NAPEPLDQ6IQ20 393 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 ACAD10Q6JQN1 1059 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 C22orf39Q6P5X5 142 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 ZNF783Q6ZMS7 281 aa9.79□□□□□ -0.84
MSH5-218ENST00000494646 ERN2Q76MJ5 926 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms