RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DNMT3LQ9UJW3 386 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 EMCNQ9ULC0 261 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 SLC12A4Q9UP95 1085 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 PLLPQ9Y342 182 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 TCAF1Q9Y4C2 921 aa10.83□□□□□ -0.68
CLCN6-208ENST00000494028 WDR91A4D1P6 747 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 TRIM43BA6NCK2 446 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 KIAA0355O15063 1070 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 GLRA3O75311 464 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 MMP2P08253 660 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 GSTA1P08263 222 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 CSF2RAP15509 400 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 TPH1P17752 444 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 BGNP21810 368 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 ATP5C1P36542 298 aaKnown RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 ACVRL1P37023 503 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 CHRNA4P43681 627 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 GJA8P48165 433 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 LIG3P49916 1009 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 SERPINB8P50452 374 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 WNT3AP56704 352 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 DSC2Q02487 901 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 IL10RBQ08334 325 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 MPP3Q13368 585 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 SERINC3Q13530 473 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 RAB33AQ14088 237 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 HNRNPDQ14103 355 aaKnown RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 TEDDM1Q5T9Z0 273 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 TMCO4Q5TGY1 634 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 KIAA1841Q6NSI8 718 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 TRPM8Q7Z2W7 1104 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 CNPY4Q8N129 248 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 NDUFAF2Q8N183 169 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 PGBD5Q8N414 524 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 PPHLN1Q8NEY8 458 aaKnown RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 PTCD2Q8WV60 388 aaKnown RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 PSMG2Q969U7 264 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 TADA1Q96BN2 335 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 TRIM43Q96BQ3 446 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 MYRFLQ96LU7 910 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF512Q96ME7 567 aaPredicted RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 PLCD4Q9BRC7 762 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 MECRQ9BV79 373 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 PITPNM3Q9BZ71 974 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 KDM4CQ9H3R0 1056 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 CYP4F11Q9HBI6 524 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 ALG13Q9NP73 1137 aaKnown RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 DONSONQ9NYP3 566 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 INSL5Q9Y5Q6 135 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 SCN8AQ9UQD0 1980 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF106Q9H2Y7 1883 aaKnown RBP10.82□□□□□ -0.68
CLCN6-208ENST00000494028 ATG2AQ2TAZ0 1938 aa10.82□□□□□ -0.68
CLCN6-208ENST00000494028 GBF1Q92538 1859 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CCDC195A0A1B0GUA6 201 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CCDC78A2IDD5 438 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 H3BNC9 293 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 KLF11O14901 512 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 PRAMEF11O60813 436 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 PMPCBO75439 489 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 NEBLO76041 1014 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 STC2O76061 302 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 UBOX5O94941 541 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 TIMP1P01033 207 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 PRKCGP05129 697 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 LINC00271P0C7V0 271 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ARNTP27540 789 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CORO1AP31146 461 aaKnown RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CRHR1P34998 444 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 MAGEA9P43362 315 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ABCG1P45844 678 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 SGSHP51688 502 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 YBEYP58557 167 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 MAXP61244 160 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ACTN3Q08043 901 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 SLC10A7Q0GE19 358 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 PDE1CQ14123 709 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 BTG3Q14201 252 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 IHHQ14623 411 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 POU6F1Q14863 301 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 VEPH1Q14D04 833 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 DBN1Q16643 649 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 PCID2Q5JVF3 399 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 HECTD3Q5T447 861 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 GRTP1Q5TC63 336 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ARMC3Q5W041 872 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CES4AQ5XG92 561 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 PDPK2PQ6A1A2 396 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 KIAA0930Q6ICG6 404 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 PKN3Q6P5Z2 889 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 RFWD3Q6PCD5 774 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 STRA8Q7Z7C7 330 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CMC1Q7Z7K0 106 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 DDX53Q86TM3 631 aaKnown RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CNTN4Q8IWV2 1026 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 DCLK2Q8N568 766 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ARMC2Q8NEN0 867 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 OR52K2Q8NGK3 314 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF461Q8TAF7 563 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 AUTS2Q8WXX7 1259 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms