RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 GLDCP23378 1020 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 CD70P32970 193 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 RENBPP51606 427 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 BASP1P80723 227 aaKnown RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 CDK16Q00536 496 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 GAD2Q05329 585 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 RFTN1Q14699 578 aaPredicted RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 DHCR24Q15392 516 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 PUS10Q3MIT2 529 aaKnown RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 SPDYCQ5MJ68 293 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 FAXCQ5TGI0 409 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 PID1Q7Z2X4 250 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 PGBD5Q8N414 524 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 TTC16Q8NEE8 873 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 FCRL5Q96RD9 977 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 MLPHQ9BV36 600 aaPredicted RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 FRMD8Q9BZ67 464 aaPredicted RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 TSPYL1Q9H0U9 437 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 ZFP14Q9HCL3 533 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 DUS2Q9NX74 493 aaKnown RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 INTS6Q9UL03 887 aaKnown RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
VPS52-220ENST00000493674 CUL9Q8IWT3 2517 aa12.89□□□□□ -0.35
VPS52-220ENST00000493674 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 EIF3HO15372 352 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS52-220ENST00000493674 ECI2O75521 394 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 TYRP14679 529 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 HLA-FP30511 346 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 MMP13P45452 471 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 PDGFRLQ15198 375 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 SLC14A2Q15849 920 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 UAP1Q16222 522 aaPredicted RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 PLEKHG6Q3KR16 790 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 LEXMQ3ZCV2 418 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 MARC1Q5VT66 337 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 IL31Q6EBC2 164 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 CAND1Q86VP6 1230 aaKnown RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 ETFBKMTQ8IXQ9 262 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 TAB3Q8N5C8 712 aaPredicted RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 USP33Q8TEY7 942 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 ACDQ96AP0 544 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 IMP4Q96G21 291 aaKnown RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 OXNAD1Q96HP4 312 aaPredicted RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 PWWP2AQ96N64 755 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 AGAP3Q96P47 875 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 PPP1R2P1Q96PQ5 205 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 PSKH2Q96QS6 385 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 MGME1Q9BQP7 344 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 PLA2G2FQ9BZM2 168 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 MUC3BQ9H195 1237 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 SLC25A51Q9H1U9 297 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 HPS4Q9NQG7 708 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS52-220ENST00000493674 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 UBA2Q9UBT2 640 aaPredicted RBP12.88□□□□□ -0.35
VPS52-220ENST00000493674 RSPH14Q9UHP6 348 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 VPS51Q9UID3 782 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 TTC28Q96AY4 2481 aa12.88□□□□□ -0.35
VPS52-220ENST00000493674 VCANP13611 3396 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 ATG2BQ96BY7 2078 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 ARNTLO00327 626 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 MAP2K7O14733 419 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 MUSKO15146 869 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 SNAP91O60641 907 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 NFATC1O95644 943 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 AP2A1O95782 977 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 ADH1CP00326 375 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 APRTP07741 180 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 MMP2P08253 660 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 ADH5P11766 374 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 MLNP12872 115 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 ARSAP15289 507 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 CR2P20023 1033 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 DHX9Q08211 1270 aaKnown RBP12.87□□□□□ -0.35
VPS52-220ENST00000493674 SMAD4Q13485 552 aaKnown RBP12.87□□□□□ -0.35
VPS52-220ENST00000493674 HTR4Q13639 388 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 DMC1Q14565 340 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 IHHQ14623 411 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 SLMAPQ14BN4 828 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 HIF1AQ16665 826 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 PITRM1Q5JRX3 1037 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 TRIM68Q6AZZ1 485 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 KDELC1Q6UW63 502 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 PPP1R21Q6ZMI0 780 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 OTOP3Q7RTS5 596 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 APCDD1Q8J025 514 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 TSEN2Q8NCE0 465 aaKnown RBP12.87□□□□□ -0.35
VPS52-220ENST00000493674 ARRDC2Q8TBH0 407 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 NSMCE1Q8WV22 266 aa12.87□□□□□ -0.35
VPS52-220ENST00000493674 FGF14Q92915 247 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms