RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FSCBQ5H9T9 825 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 RNF219Q5W0B1 726 aaPredicted RBP13.71□□□□□ -0.21
MSH6-208ENST00000493177 IL31Q6EBC2 164 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 CXorf57Q6NSI4 855 aaKnown RBP13.71□□□□□ -0.21
MSH6-208ENST00000493177 ZC3H18Q86VM9 953 aaKnown RBP13.71□□□□□ -0.21
MSH6-208ENST00000493177 UMODL1-AS1Q8N2C9 162 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 CCNYQ8ND76 341 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 FIBINQ8TAL6 211 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 WFDC5Q8TCV5 224 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 ATG4AQ8WYN0 398 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 SLC39A8Q9C0K1 460 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 DTLQ9NZJ0 730 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 ZNF212Q9UDV6 495 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 R3HDM2Q9Y2K5 976 aaKnown RBP13.71□□□□□ -0.21
MSH6-208ENST00000493177 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
MSH6-208ENST00000493177 NUP205Q92621 2012 aa13.71□□□□□ -0.22
MSH6-208ENST00000493177 FAM186AA6NE01 2351 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 ILVBLA1L0T0 632 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 PRR5-ARHGAP8B1AHC4 643 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 PRRT4C9JH25 899 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 EPN2O95208 641 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 SDHBP21912 280 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 CD70P32970 193 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 ACVRL1P37023 503 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 DHPSP49366 369 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 PAPOLAP51003 745 aaKnown RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 YBEYP58557 167 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 ARHGAP8P85298 464 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 CREB5Q02930 508 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 LMAN2Q12907 356 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 SLC10A2Q12908 348 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 STARD3Q14849 445 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 PDK1Q15118 436 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 NOMO1Q15155 1222 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 SIX1Q15475 284 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 CCDC6Q16204 474 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 RSPO4Q2I0M5 234 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 PARP15Q460N3 678 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 PLK5Q496M5 336 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 DARS2Q6PI48 645 aaKnown RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 RASSF3Q86WH2 238 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 ARHGAP12Q8IWW6 846 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 TP53INP2Q8IXH6 220 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 ATPAF2Q8N5M1 289 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 OR7D4Q8NG98 312 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 LRRN4Q8WUT4 740 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 MAGOHBQ96A72 148 aaKnown RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 HMCESQ96FZ2 354 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 SLC2A11Q9BYW1 496 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 FRMD8P1Q9BZ68 369 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 KLC2Q9H0B6 622 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 MAGEH1Q9H213 219 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 NOL6Q9H6R4 1146 aaKnown RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 LRRC19Q9H756 370 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 ATP13A1Q9HD20 1204 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 HOMER3Q9NSC5 361 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 ABCB8Q9NUT2 735 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 CACNA2D2Q9NY47 1150 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 VPS28Q9UK41 221 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 TBC1D30Q9Y2I9 924 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 STARD13Q9Y3M8 1113 aa13.7□□□□□ -0.22
MSH6-208ENST00000493177 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.7□□□□□ -0.22
MSH6-208ENST00000493177 PIEZO1Q92508 2521 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 DOCK4Q8N1I0 1966 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 PLXND1Q9Y4D7 1925 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 A0A0D9SEW6 157 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 SYNCRIPO60506 623 aaKnown RBP13.69□□□□□ -0.22
MSH6-208ENST00000493177 FOXD2O60548 495 aaPredicted RBP13.69□□□□□ -0.22
MSH6-208ENST00000493177 ADAM23O75077 832 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 CISD3P0C7P0 127 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 HNRNPLP14866 589 aaKnown RBP eCLIP13.69□□□□□ -0.22
MSH6-208ENST00000493177 MZF1P28698 734 aaPredicted RBP13.69□□□□□ -0.22
MSH6-208ENST00000493177 ETFBP38117 255 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 GALNT2Q10471 571 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 AP1B1Q10567 949 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 CSRP2Q16527 193 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 GEN1Q17RS7 908 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 AFMIDQ63HM1 303 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 ZNF783Q6ZMS7 281 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 PRR23CQ6ZRP0 262 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 CDKL3Q8IVW4 592 aaPredicted RBP13.69□□□□□ -0.22
MSH6-208ENST00000493177 KLHL7Q8IXQ5 586 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 CEP112Q8N8E3 955 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 PRELID2Q8N945 189 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 MNS1Q8NEH6 495 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 OR52K2Q8NGK3 314 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 TFB1MQ8WVM0 346 aaKnown RBP13.69□□□□□ -0.22
MSH6-208ENST00000493177 RLN3Q8WXF3 142 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 ARHGEF2Q92974 986 aaKnown RBP13.69□□□□□ -0.22
MSH6-208ENST00000493177 CCDC114Q96M63 670 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 ACOX2Q99424 681 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 DUSP15Q9H1R2 295 aaPredicted RBP13.69□□□□□ -0.22
MSH6-208ENST00000493177 SP110Q9HB58 689 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
MSH6-208ENST00000493177 GGA2Q9UJY4 613 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms