RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MTHFRP42898 656 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 SYCP2LQ5T4T6 812 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 TMCO4Q5TGY1 634 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 PPP1R21Q6ZMI0 780 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 TMEM25Q86YD3 366 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 ADGRG2Q8IZP9 1017 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 FIBINQ8TAL6 211 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 WFDC5Q8TCV5 224 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 BPIFB1Q8TDL5 484 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 RSPRY1Q96DX4 576 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 ZNF419Q96HQ0 510 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 MSLNLQ96KJ4 702 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 ZNF599Q96NL3 588 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 LRRC3BQ96PB8 259 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 FEM1AQ9BSK4 669 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 BBS2Q9BXC9 721 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 ACE2Q9BYF1 805 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 FRMD8Q9BZ67 464 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 PDFQ9HBH1 243 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 DUS2Q9NX74 493 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 OBP2AQ9NY56 170 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 VPS28Q9UK41 221 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 NEDD8-MDP1E9PL57 170 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 F5H423 210 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 CBX4O00257 560 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 PENKP01210 267 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 NFKB1P19838 968 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 TPSB2P20231 275 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 MZF1P28698 734 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 MMP13P45452 471 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 NUMBP49757 651 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 ARL4CP56559 192 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 CDK16Q00536 496 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 SLC10A7Q0GE19 358 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 HIF1AQ16665 826 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 DNAJC21Q5F1R6 531 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 LY6G5CQ5SRR4 150 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 TEX26Q8N6G2 289 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 OSCP1Q8WVF1 389 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 PWWP2AQ96N64 755 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 RBM15Q96T37 977 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 EIF2B3Q9NR50 452 aaKnown RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 KIAA1522Q9P206 1035 aaPredicted RBP14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 PLAAQ9Y263 795 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 TTLL3Q9Y4R7 772 aa14.34□□□□□ -0.11
PDZRN3-210ENST00000492909 KIF26AQ9ULI4 1882 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 HMGB1P1B2RPK0 211 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 HLA-DQB2P05538 268 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 HSD17B3P37058 310 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 CSKP41240 450 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 IFNAR2P48551 515 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 PRPSAP1Q14558 356 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 LBRQ14739 615 aaKnown RBP14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 CENPUQ71F23 418 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 PDIK1LQ8N165 341 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 SH2D3CQ8N5H7 860 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 PDCD7Q8N8D1 485 aaKnown RBP14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 MCUQ8NE86 351 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 E2F7Q96AV8 911 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 ATP6V1G3Q96LB4 118 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 PPP1R2P1Q96PQ5 205 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 TXLNGYQ9BZA5 131 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 PHACTR1Q9C0D0 580 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 TMBIM4Q9HC24 238 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 GLOD4Q9HC38 313 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 ZFP14Q9HCL3 533 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 DNAJC17Q9NVM6 304 aaKnown RBP14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 HAUS2Q9NVX0 235 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 MARK1Q9P0L2 795 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 UBA2Q9UBT2 640 aaPredicted RBP14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 CD207Q9UJ71 328 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 OR51B4Q9Y5P0 310 aa14.33□□□□□ -0.12
PDZRN3-210ENST00000492909 UNC80Q8N2C7 3258 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 ERI2A8K979 691 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 HEPACAM2A8MVW5 462 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 CACNG3O60359 315 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 TYRP14679 529 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 GLDCP23378 1020 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 FCARP24071 287 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 GBP2P32456 591 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 PMS2P54278 862 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 SARNPP82979 210 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 GAD2Q05329 585 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 TNK2Q07912 1038 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 SLC12A1Q13621 1099 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 KCTD16Q68DU8 428 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 OTOP3Q7RTS5 596 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 BBS5Q8N3I7 341 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 DCAF4L2Q8NA75 395 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 SMRP1Q8NCR6 262 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 ALG14Q96F25 216 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 FCRL5Q96RD9 977 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 MYADMQ96S97 322 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 C2orf49Q9BVC5 232 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 NT5MQ9NPB1 228 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 THG1LQ9NWX6 298 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 CLEC4EQ9ULY5 219 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms