RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ACBD6Q9BR61 282 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 NAT9Q9BTE0 207 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ZFYVE28Q9HCC9 887 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 MAFKO60675 156 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ADAMTS4O75173 837 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 SBK3P0C264 359 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ARNTP27540 789 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 EPHA3P29320 983 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 SERPINB5P36952 375 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 OR1G1P47890 313 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 GATMP50440 423 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ATXN3P54252 364 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-220ENST00000492280 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ITKQ08881 620 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 SPDYAQ5MJ70 313 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 C1orf146Q5VVC0 180 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ENDOVQ8N8Q3 282 aaKnown RBP12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ATAD1Q8NBU5 361 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 ACMSDQ8TDX5 336 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 UCMAQ8WVF2 138 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 PYDC1Q8WXC3 89 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 SOCS4Q8WXH5 440 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 PABPC5Q96DU9 382 aaKnown RBP12.65□□□□□ -0.38
HMGN1-220ENST00000492280 TBL1YQ9BQ87 522 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 DCLRE1BQ9H816 532 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 NMRAL1Q9HBL8 299 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 RBM22Q9NW64 420 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■□□□ 13.5
HMGN1-220ENST00000492280 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 HS3ST4Q9Y661 456 aa12.65□□□□□ -0.38
HMGN1-220ENST00000492280 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 J3KR12 359 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 BAG2O95816 211 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 MSX2P35548 267 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 ETFBP38117 255 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 SLC1A2P43004 574 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 PAPOLAP51003 745 aaKnown RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 TSPY1Q01534 308 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 DLG1Q12959 904 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 TUSC3Q13454 348 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 PSMD5Q16401 504 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 CFAP157Q5JU67 520 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 RBM20Q5T481 1227 aaKnown RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 PIK3R6Q5UE93 754 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 ZNF470Q6ECI4 717 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 DCLRE1AQ6PJP8 1040 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 CYS1Q717R9 158 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 ZC3HC1Q86WB0 502 aaKnown RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 CCNJLQ8IV13 435 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 SNX31Q8N9S9 440 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 SH3RF2Q8TEC5 729 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 FSD1LQ9BXM9 530 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 NUF2Q9BZD4 464 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 IL22Q9GZX6 179 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 TRPV6Q9H1D0 765 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 PPM1HQ9ULR3 514 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 ACTL7AQ9Y615 435 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 E9PAM4 449 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 NEBLO76041 1014 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 F9P00740 461 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 SLC35E2BP0CK96 405 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 HAPLN1P10915 354 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 PRKAR2AP13861 404 aaKnown RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 PLK1P53350 603 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 NAGLUP54802 743 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 EFEMP1Q12805 493 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 CUL3Q13618 768 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 IHHQ14623 411 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 ALFQ53S48 1182 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 DENND5AQ6IQ26 1287 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 FRMD7Q6ZUT3 714 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 CENPLQ8N0S6 344 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 KLHDC9Q8NEP7 349 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 ACE2Q9BYF1 805 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-220ENST00000492280 CYP4F12Q9HCS2 524 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 XPR1Q9UBH6 696 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
HMGN1-220ENST00000492280 OR51F1A6NGY5 319 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 IGHA2P01877 340 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 CPOXP36551 454 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 PTPRCAPQ14761 206 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 PDCD2Q16342 344 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 ARTNQ5T4W7 220 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 CLEC14AQ86T13 490 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 RTN4RL1Q86UN2 441 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 CCNYL1Q8N7R7 359 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 TDRD5Q8NAT2 981 aaKnown RBP12.63□□□□□ -0.39
HMGN1-220ENST00000492280 APBB2Q92870 758 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 MYEOVQ96EZ4 313 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 NT5MQ9NPB1 228 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 Q9Y3F1 56 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 NT5C1B-RDH14C9J2C7 533 aa12.63□□□□□ -0.39
HMGN1-220ENST00000492280 NCAM2O15394 837 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms