RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 GALK1P51570 392 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNX12-205ENST00000490561 PRPSAP1Q14558 356 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 MLF2Q15773 248 aaPredicted RBP13.48□□□□□ -0.25
SNX12-205ENST00000490561 SLC44A4Q53GD3 710 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 ANKRD20A2Q5SQ80 823 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 ANKRD20A1Q5TYW2 823 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 ANKRD20A3Q5VUR7 823 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 ATP11CQ8NB49 1132 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 NOA1Q8NC60 698 aaKnown RBP13.48□□□□□ -0.25
SNX12-205ENST00000490561 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 PSKH2Q96QS6 385 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 POLR1EQ9GZS1 481 aaKnown RBP13.48□□□□□ -0.25
SNX12-205ENST00000490561 HEBP1Q9NRV9 189 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 WNT16Q9UBV4 365 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 ERVW-1Q9UQF0 538 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 ATP8A1Q9Y2Q0 1164 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 MRPS17Q9Y2R5 130 aaKnown RBP13.48□□□□□ -0.25
SNX12-205ENST00000490561 STARD13Q9Y3M8 1113 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 KIAA1549LQ6ZVL6 1849 aa13.48□□□□□ -0.25
SNX12-205ENST00000490561 COL4A2P08572 1712 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 SMAPO00193 183 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 TTI1O43156 1089 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 PSMD3O43242 534 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 ATP9BO43861 1147 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 TMCC1O94876 653 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 GSRP00390 522 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 GLDCP23378 1020 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 SOX9P48436 509 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 GDF10P55107 478 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 NSUN2Q08J23 767 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNX12-205ENST00000490561 SLC10A7Q0GE19 358 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 ZBTB17Q13105 803 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 SLC14A2Q15849 920 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 PARP6Q2NL67 630 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 FBXO43Q4G163 708 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 TMEM196Q5HYL7 178 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 ALG1LQ6GMV1 187 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 PID1Q7Z2X4 250 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 TRMT11Q7Z4G4 463 aaKnown RBP13.47□□□□□ -0.25
SNX12-205ENST00000490561 PCGF5Q86SE9 256 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 ZNF567Q8N184 647 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 SH2D3CQ8N5H7 860 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 PCDH20Q8N6Y1 951 aaKnown RBP13.47□□□□□ -0.25
SNX12-205ENST00000490561 CHFRQ96EP1 664 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 ERP44Q9BS26 406 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 GBA3Q9H227 469 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 ASIC3Q9UHC3 531 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 RSPH14Q9UHP6 348 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 NEU2Q9Y3R4 380 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 TICRRQ7Z2Z1 1910 aa13.47□□□□□ -0.25
SNX12-205ENST00000490561 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.25
SNX12-205ENST00000490561 TARSL2A2RTX5 802 aaKnown RBP13.46□□□□□ -0.25
SNX12-205ENST00000490561 TRIM24O15164 1050 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 IGSF6O95976 241 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 SRCP12931 536 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNX12-205ENST00000490561 RPL22P35268 128 aaKnown RBP13.46□□□□□ -0.25
SNX12-205ENST00000490561 CSNK1DP48730 415 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 RHOAP61586 193 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 SNRPD1P62314 119 aaKnown RBP13.46□□□□□ -0.25
SNX12-205ENST00000490561 GRM3Q14832 879 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 CYTH1Q15438 398 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 HSF5Q4G112 596 aaPredicted RBP13.46□□□□□ -0.25
SNX12-205ENST00000490561 TEX35Q5T0J7 233 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 TMEM215Q68D42 235 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 LINGO4Q6UY18 593 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 ZNF852Q6ZMS4 543 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 B4GALNT4Q76KP1 1039 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 RNF135Q8IUD6 432 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 GJD3Q8N144 294 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 CCDC110Q8TBZ0 833 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 USP33Q8TEY7 942 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 LRRN4Q8WUT4 740 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 UBXN4Q92575 508 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 GDAP1L1Q96MZ0 367 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 AGAP3Q96P47 875 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 FCRL5Q96RD9 977 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 MGME1Q9BQP7 344 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 LRRC1Q9BTT6 524 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 SLC25A51Q9H1U9 297 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 C10orf88Q9H8K7 445 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 GLOD4Q9HC38 313 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 NT5MQ9NPB1 228 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 THAP10Q9P2Z0 257 aaPredicted RBP13.46□□□□□ -0.25
SNX12-205ENST00000490561 FBXL21Q9UKT6 434 aa13.46□□□□□ -0.25
SNX12-205ENST00000490561 AAR2Q9Y312 384 aaKnown RBP13.46□□□□□ -0.25
SNX12-205ENST00000490561 ERI2A8K979 691 aaKnown RBP13.45□□□□□ -0.26
SNX12-205ENST00000490561 PRRT4C9JH25 899 aa13.45□□□□□ -0.26
SNX12-205ENST00000490561 ANXA9O76027 345 aa13.45□□□□□ -0.26
SNX12-205ENST00000490561 HEXIM1O94992 359 aaKnown RBP13.45□□□□□ -0.26
SNX12-205ENST00000490561 CD160O95971 181 aa13.45□□□□□ -0.26
SNX12-205ENST00000490561 HLA-DQB2P05538 268 aa13.45□□□□□ -0.26
SNX12-205ENST00000490561 TUBBP07437 444 aa13.45□□□□□ -0.26
SNX12-205ENST00000490561 CA4P22748 312 aa13.45□□□□□ -0.26
SNX12-205ENST00000490561 MCM3P25205 808 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms