RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PDGFRLQ15198 375 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 TRIM68Q6AZZ1 485 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 VITQ6UXI7 678 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 CENPUQ71F23 418 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 APCDD1Q8J025 514 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 RBM15Q96T37 977 aaKnown RBP eCLIP21.25■□□□□ 0.99
SND1-214ENST00000489417 MLPHQ9BV36 600 aaPredicted RBP21.25■□□□□ 0.99
SND1-214ENST00000489417 FUT8Q9BYC5 575 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 SEPT3Q9UH03 358 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 VPS51Q9UID3 782 aa21.25■□□□□ 0.99
SND1-214ENST00000489417 USP15Q9Y4E8 981 aaPredicted RBP21.25■□□□□ 0.99
SND1-214ENST00000489417 GOLGA6CA6NDK9 693 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 GOLGA6BA6NDN3 693 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ERI2A8K979 691 aaKnown RBP21.24■□□□□ 0.99
SND1-214ENST00000489417 EIF3HO15372 352 aaKnown RBP eCLIP21.24■□□□□ 0.99
SND1-214ENST00000489417 PSMD3O43242 534 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 AP2A1O95782 977 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ADH1CP00326 375 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 GOLGA6DP0CG33 693 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ADH5P11766 374 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ARSAP15289 507 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 PMS2P54278 862 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 SARNPP82979 210 aaKnown RBP21.24■□□□□ 0.99
SND1-214ENST00000489417 PLEKHG6Q3KR16 790 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 FNBP1LQ5T0N5 605 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 KLHDC8BQ8IXV7 354 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 PGBD5Q8N414 524 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ST13P5Q8NFI4 369 aaPredicted RBP21.24■□□□□ 0.99
SND1-214ENST00000489417 SUSD6Q92537 303 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ATP2A3Q93084 1043 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 SERPINB12Q96P63 405 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 C2orf49Q9BVC5 232 aaPredicted RBP21.24■□□□□ 0.99
SND1-214ENST00000489417 SLC2A11Q9BYW1 496 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 SLC25A51Q9H1U9 297 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 SAYSD1Q9NPB0 183 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ABCB8Q9NUT2 735 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 HAUS2Q9NVX0 235 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 GOLGA6AQ9NYA3 693 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 ACTL7AQ9Y615 435 aa21.24■□□□□ 0.99
SND1-214ENST00000489417 HOXC11O43248 304 aaPredicted RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 ANXA9O76027 345 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 HLA-FP30511 346 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 GEMP55040 296 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 ITKQ08881 620 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 PITRM1Q5JRX3 1037 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 ASTLQ6HA08 431 aaPredicted RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 RELL1Q8IUW5 271 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 MFSD6LQ8IWD5 586 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 PDIK1LQ8N165 341 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 ELSPBP1Q96BH3 223 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 OXNAD1Q96HP4 312 aaPredicted RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 ZFYVE19Q96K21 471 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 FAM83CQ9BQN1 747 aa21.23■□□□□ 0.99
SND1-214ENST00000489417 CINPQ9BW66 212 aaPredicted RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 XAB2Q9HCS7 855 aaKnown RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 INTS6Q9UL03 887 aaKnown RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 AAR2Q9Y312 384 aaKnown RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 KIF26AQ9ULI4 1882 aaPredicted RBP21.23■□□□□ 0.99
SND1-214ENST00000489417 E7ESA3 106 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 ATP8B1O43520 1251 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 SUN1O94901 812 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 HSD17B3P37058 310 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 MAXP61244 160 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 FCHO2Q0JRZ9 810 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 PDIA2Q13087 525 aaKnown RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 CYTH1Q15438 398 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 UAP1Q16222 522 aaPredicted RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 SPDYCQ5MJ68 293 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 KCTD11Q693B1 232 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 RETSATQ6NUM9 610 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 LINGO4Q6UY18 593 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 ZNF534Q76KX8 674 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 TRMT10CQ7L0Y3 403 aaKnown RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 CAND1Q86VP6 1230 aaKnown RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 YAF2Q8IY57 180 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.22■□□□□ 0.99
SND1-214ENST00000489417 SPATA22Q8NHS9 363 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 UBLCP1Q8WVY7 318 aaPredicted RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 ACDQ96AP0 544 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 IMP4Q96G21 291 aaKnown RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 KXD1Q9BQD3 176 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 PLA2G2FQ9BZM2 168 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 POLR1EQ9GZS1 481 aaKnown RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 CDC42EP4Q9H3Q1 356 aaKnown RBP21.22■□□□□ 0.99
SND1-214ENST00000489417 EBF3Q9H4W6 596 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 LRRC40Q9H9A6 602 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 GGA2Q9UJY4 613 aa21.22■□□□□ 0.99
SND1-214ENST00000489417 H3BQ06 376 aaPredicted RBP21.21■□□□□ 0.99
SND1-214ENST00000489417 MAP2K7O14733 419 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 CD160O95971 181 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 PABPC1P11940 636 aaKnown RBP21.21■□□□□ 0.99
SND1-214ENST00000489417 MAGEA4P43358 317 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 GEMIN4P57678 1058 aaKnown RBP21.21■□□□□ 0.99
SND1-214ENST00000489417 DSC2Q02487 901 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 NIPAL4Q0D2K0 466 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 CBLBQ13191 982 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 SPARCL1Q14515 664 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 BBS9Q3SYG4 887 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 MSS51Q4VC12 460 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 INO80DQ53TQ3 878 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms