RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 NIPAL4Q0D2K0 466 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 ELAVL2Q12926 359 aaKnown RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CAMK1Q14012 370 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 BTG3Q14201 252 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 ADGRE1Q14246 886 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 EFTUD2Q15029 972 aaKnown RBP eCLIP8.63□□□□□ -1.033e-6■■■■■ 41.9
VTI1A-207ENST00000489357 TEX44Q53QW1 395 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 NOMO2Q5JPE7 1267 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 GRTP1Q5TC63 336 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 MANEALQ5VSG8 457 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 FAM91A1Q658Y4 838 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 KCTD11Q693B1 232 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CD300LGQ6UXG3 332 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 DENND5BQ6ZUT9 1274 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 HFE2Q6ZVN8 426 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 PID1Q7Z2X4 250 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CCDC91Q7Z6B0 441 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TMEM135Q86UB9 458 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 MON1AQ86VX9 555 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 ZNF567Q8N184 647 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 AGGF1Q8N302 714 aaeCLIP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 FIBCD1Q8N539 461 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CFAP61Q8NHU2 1237 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 MAFAQ8NHW3 353 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 C2orf15Q8WU43 125 aaKnown RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 DEPDC1BQ8WUY9 529 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TEKT5Q96M29 485 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TMEM237Q96Q45 408 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 RAB3IPQ96QF0 476 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 SRPK1Q96SB4 655 aaKnown RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 KCNK16Q96T55 309 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 LGMNQ99538 433 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CPNE1Q99829 537 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 PAIP2Q9BPZ3 127 aaKnown RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 C17orf80Q9BSJ5 609 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TKTL2Q9H0I9 626 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 ZCWPW1Q9H0M4 648 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 STN1Q9H668 368 aaKnown RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CERS4Q9HA82 394 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 KIF9Q9HAQ2 790 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 PLAC1Q9HBJ0 212 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CASS4Q9NQ75 786 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TBC1D13Q9NVG8 400 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 DNAAF2Q9NVR5 837 aaKnown RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 CLIC5Q9NZA1 410 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 IL37Q9NZH6 218 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 SIRPGQ9P1W8 387 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 KLHL8Q9P2G9 620 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 TXNDC16Q9P2K2 825 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 DCDC2Q9UHG0 476 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 SCML2Q9UQR0 700 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 MTO1Q9Y2Z2 717 aaKnown RBP8.63□□□□□ -1.03
VTI1A-207ENST00000489357 PLLPQ9Y342 182 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 PLXNA3P51805 1871 aa8.63□□□□□ -1.03
VTI1A-207ENST00000489357 VWA8A3KMH1 1905 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 A0A1W2PRU2 124 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 FAM92AA1XBS5 289 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 I3L4J1 428 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 RFXAPO00287 272 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 TRAFD1O14545 582 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 SPINT1O43278 529 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 DNAJC6O75061 913 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 RFPL1O75677 317 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 DDHD2O94830 711 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 LRIG2O94898 1065 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 UNC5CO95185 931 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 RTN3O95197 1032 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 POMCP01189 267 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 BDNFP23560 247 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 PTPN3P26045 913 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 SLC8A1P32418 973 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 GP5P40197 560 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 SERPINB4P48594 390 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 NRLP54845 237 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 CSE1LP55060 971 aaKnown RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 PITX1P78337 314 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 CDH17Q12864 832 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 CRYMQ14894 314 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 ZKSCAN8Q15776 578 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 TBCCQ15814 346 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 ANO4Q32M45 955 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 FAXCQ5TGI0 409 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 BTBD8Q5XKL5 378 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 CGB2Q6NT52 195 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 OTOAQ7RTW8 1153 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 GPRIN1Q7Z2K8 1008 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 PRPF39Q86UA1 669 aaKnown RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 TAC4Q86UU9 113 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 ZNF280BQ86YH2 543 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 COLGALT2Q8IYK4 626 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 GABPB2Q8TAK5 448 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 SPPL3Q8TCT6 385 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 DQX1Q8TE96 717 aaKnown RBP8.62□□□□□ -1.03
VTI1A-207ENST00000489357 C10orf82Q8WW14 230 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 ARNTL2Q8WYA1 636 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 PBXIP1Q96AQ6 731 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 TBC1D31Q96DN5 1066 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 CERS2Q96G23 380 aa8.62□□□□□ -1.03
VTI1A-207ENST00000489357 OXNAD1Q96HP4 312 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms