RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 NDFIP2Q9NV92 336 aa12.83□□□□□ -0.36
SRRM1-216ENST00000489130 SEPT11Q9NVA2 429 aaKnown RBP12.83□□□□□ -0.36
SRRM1-216ENST00000489130 TMEM248Q9NWD8 314 aa12.83□□□□□ -0.36
SRRM1-216ENST00000489130 DMTF1Q9Y222 760 aa12.83□□□□□ -0.36
SRRM1-216ENST00000489130 MSRB2Q9Y3D2 182 aa12.83□□□□□ -0.36
SRRM1-216ENST00000489130 KMT2BQ9UMN6 2715 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-216ENST00000489130 DOCK4Q8N1I0 1966 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 A0A1B0GTQ1 180 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 SMTNL1A8MU46 457 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 FAM72CH0Y354 149 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 KPNA3O00505 521 aaPredicted RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 DKK1O94907 266 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 ETFBP38117 255 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 ZNF143P52747 638 aaPredicted RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 CCDC15Q0P6D6 951 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 PPP1R15BQ5SWA1 713 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 FAM72AQ5TYM5 149 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 FAM72DQ6L9T8 149 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 RWDD4Q6NW29 188 aaKnown RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 DNAJC24Q6P3W2 148 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 DPY19L3Q6ZPD9 716 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 PRPF39Q86UA1 669 aaKnown RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 FAM72BQ86X60 149 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 CHCHD4Q8N4Q1 142 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 PCDH20Q8N6Y1 951 aaKnown RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 KDF1Q8NAX2 398 aaPredicted RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 CHST14Q8NCH0 376 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 RHBDD1Q8TEB9 315 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 TBC1D31Q96DN5 1066 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 MCEEQ96PE7 176 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 ELF4Q99607 663 aaPredicted RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 TNKS2Q9H2K2 1166 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 GDF3Q9NR23 364 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 TOR4AQ9NXH8 423 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 IL36AQ9UHA7 158 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 BTBD3Q9Y2F9 522 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 CEP295Q9C0D2 2601 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 FRYQ5TBA9 3013 aa12.82□□□□□ -0.36
SRRM1-216ENST00000489130 MAP1BP46821 2468 aaKnown RBP12.82□□□□□ -0.36
SRRM1-216ENST00000489130 A0A1W2PQC6 194 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ANKRD62A6NC57 917 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 TMEM8BA6NDV4 472 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 TLR4O00206 839 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 RNF103O00237 685 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 CCP110O43303 1012 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 CD160O95971 181 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 PLEKP08567 350 aaPredicted RBP12.81□□□□□ -0.36
SRRM1-216ENST00000489130 MAT2AP31153 395 aaKnown RBP12.81□□□□□ -0.36
SRRM1-216ENST00000489130 L1CAMP32004 1257 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ACVRL1P37023 503 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 RECQLP46063 649 aaPredicted RBP12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ZNF165P49910 485 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 NXPH1P58417 271 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 RPL7AP62424 266 aaKnown RBP12.81□□□□□ -0.36
SRRM1-216ENST00000489130 IL9RQ01113 521 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 OVGP1Q12889 678 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 SHBQ15464 509 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 SETMARQ53H47 684 aaPredicted RBP12.81□□□□□ -0.36
SRRM1-216ENST00000489130 SLC45A4Q5BKX6 768 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ARSIQ5FYB1 569 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ACAD10Q6JQN1 1059 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 PPP1R2P3Q6NXS1 205 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 NEK5Q6P3R8 708 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 SLFN11Q7Z7L1 901 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 SLCO6A1Q86UG4 719 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 IQCHQ86VS3 1027 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 MCOLN2Q8IZK6 566 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 MFSD2AQ8NA29 543 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 GRIN3AQ8TCU5 1115 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ARHGEF2Q92974 986 aaKnown RBP12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ISG20Q96AZ6 181 aaKnown RBP12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ARRDC3Q96B67 414 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 PPP1R16AQ96I34 528 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 CNPY3Q9BT09 278 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 HDAC8Q9BY41 377 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 MAGEB5Q9BZ81 275 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 MAGEH1Q9H213 219 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 ERVMER34-1Q9H9K5 563 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 DYRK4Q9NR20 520 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 DNAI1Q9UI46 699 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 WASF2Q9Y6W5 498 aa12.81□□□□□ -0.36
SRRM1-216ENST00000489130 TMEM131Q92545 1883 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 A0A1B0GTH6 734 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 LRRC53A6NM62 1247 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 YKT6O15498 198 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 RAMP2O60895 175 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 LEFTY1O75610 366 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 KRT37O76014 449 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 CCNHP51946 323 aaPredicted RBP12.8□□□□□ -0.36
SRRM1-216ENST00000489130 AIF1P55008 147 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 GEMIN4P57678 1058 aaKnown RBP12.8□□□□□ -0.36
SRRM1-216ENST00000489130 INAVAQ3KP66 663 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 FILIP1LQ4L180 1135 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 CARD16Q5EG05 197 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 EFHC2Q5JST6 749 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
SRRM1-216ENST00000489130 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms