RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ZWILCHQ9H900 591 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 CTTNBP2NLQ9P2B4 639 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 EIF2B4Q9UI10 523 aaKnown RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 LCMT1Q9UIC8 334 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 TPX2Q9ULW0 747 aaKnown RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 KNL1Q8NG31 2342 aa14.58□□□□□ -0.08
BRCA1-218ENST00000489037 CNOT1A5YKK6 2376 aaKnown RBP14.58□□□□□ -0.08
BRCA1-218ENST00000489037 KPNA3O00505 521 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 BCAT2O15382 392 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 SLC7A4O43246 635 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 SMAD6O43541 496 aaKnown RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 BUB1O43683 1085 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ZMPSTE24O75844 475 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ENGP17813 658 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ARL4AP40617 200 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ARF5P84085 180 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 SEMA3BQ13214 749 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 TEAD4Q15561 434 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 HADHQ16836 314 aaKnown RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 CARD16Q5EG05 197 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ERMP1Q7Z2K6 904 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 RYBPQ8N488 228 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ZCCHC9Q8N567 271 aaKnown RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 AADATQ8N5Z0 425 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ARFGAP1Q8N6T3 406 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 TMIEQ8NEW7 156 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 CASKIN2Q8WXE0 1202 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ISG20Q96AZ6 181 aaKnown RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 PPP1R16AQ96I34 528 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 GTPBP2Q9BX10 602 aaKnown RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 TNKS2Q9H2K2 1166 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 RXFP3Q9NSD7 469 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 UVRAGQ9P2Y5 699 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 IL36AQ9UHA7 158 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 PPM1HQ9ULR3 514 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 NEU3Q9UQ49 428 aa14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 ASCC3Q8N3C0 2202 aaKnown RBP14.57□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3DA0A087WVF3 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3IA0A087WXS9 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3EA0A087X179 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3KA0A087X1G2 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3FA6NER0 549 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-218ENST00000489037 ARHGAP42A6NI28 874 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 C4orf47A7E2U8 309 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3LB9A6J9 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 RASA4BC9J798 803 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 H3BRJ5 948 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 RASA4O43374 803 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3HP0C7X1 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 CD27P26842 260 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 MAPK8P45983 427 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 NDST2P52849 883 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 SNRPD1P62314 119 aaKnown RBP14.56□□□□□ -0.08
BRCA1-218ENST00000489037 RAD51Q06609 339 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 UAP1L1Q3KQV9 507 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3GQ6DHY5 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3CQ6IPX1 549 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 NCEH1Q6PIU2 408 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 RFX8Q6ZV50 586 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 TBC1D3Q8IZP1 549 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-218ENST00000489037 UMODL1-AS1Q8N2C9 162 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 NIPA2Q8N8Q9 360 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 OR2A12Q8NGT7 310 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 ZNF564Q8TBZ8 553 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-218ENST00000489037 BIRC7Q96CA5 298 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 ARHGEF26Q96DR7 871 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 PEBP4Q96S96 227 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 KCTD15Q96SI1 283 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-218ENST00000489037 HEPHQ9BQS7 1158 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 ZDHHC5Q9C0B5 715 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 KDM4CQ9H3R0 1056 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 NHEJ1Q9H9Q4 299 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-218ENST00000489037 CAPN10Q9HC96 672 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 SERGEFQ9UGK8 458 aa14.56□□□□□ -0.08
BRCA1-218ENST00000489037 FCF1Q9Y324 198 aaKnown RBP14.56□□□□□ -0.08
BRCA1-218ENST00000489037 DCDC2BA2VCK2 349 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 ARHGAP33O14559 1287 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 DRD3P35462 400 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 HCAR3P49019 387 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 CCR5P51681 352 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 ADPRHP54922 357 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 CA9Q16790 459 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 POM121L1PQ3SYA9 428 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 ARSIQ5FYB1 569 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 DPY19L3Q6ZPD9 716 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 ADAT2Q7Z6V5 191 aaKnown RBP14.55□□□□□ -0.08
BRCA1-218ENST00000489037 PRPF39Q86UA1 669 aaKnown RBP14.55□□□□□ -0.08
BRCA1-218ENST00000489037 PLPP6Q8IY26 295 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 CHST14Q8NCH0 376 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 TEKT4Q8WW24 435 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 HSPH1Q92598 858 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 SKA1Q96BD8 255 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 HMCESQ96FZ2 354 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 BTBD6Q96KE9 485 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 CHP1Q99653 195 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 RBSNQ9H1K0 784 aa14.55□□□□□ -0.08
BRCA1-218ENST00000489037 HECAQ9UBI9 543 aaPredicted RBP14.55□□□□□ -0.08
BRCA1-218ENST00000489037 SARDHQ9UL12 918 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms