RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CLCNKBP51801 687 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 ANAPC15P60006 121 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 GRM3Q14832 879 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 GRM4Q14833 912 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 NEK10Q6ZWH5 1172 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 SH2D6Q7Z4S9 175 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 PATL1Q86TB9 770 aaKnown RBP2.87□□□□□ -1.95
CCDC93-209ENST00000488908 SERPINA11Q86U17 422 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 KRTAP7-1Q8IUC3 87 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 PGBD5Q8N414 524 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 RFWD2Q8NHY2 731 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 WDR60Q8WVS4 1066 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 GPATCH3Q96I76 525 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 COLEC11Q9BWP8 271 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 Q9N2J8 555 aa2.87□□□□□ -1.95
CCDC93-209ENST00000488908 FRMPD2Q68DX3 1309 aaPredicted RBP2.87□□□□□ -1.95
CCDC93-209ENST00000488908 NOTCH2Q04721 2471 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 TMEM247A6NEH6 219 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 SCGB1D2O95969 90 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 AMBPP02760 352 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 ATP1A1P05023 1023 aaKnown RBP2.86□□□□□ -1.95
CCDC93-209ENST00000488908 KCNA5P22460 613 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 ZNF132P52740 706 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 GBX1Q14549 363 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 CALCRLQ16602 461 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 SYTL3Q4VX76 610 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 ZNF569Q5MCW4 686 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 CLEC4CQ8WTT0 213 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 HDAC7Q8WUI4 952 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 TMEM18Q96B42 140 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 MTBPQ96DY7 904 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 FRG2BQ96QU4 278 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 GDF15Q99988 308 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 RBM4Q9BWF3 364 aaKnown RBP2.86□□□□□ -1.95
CCDC93-209ENST00000488908 EPS8L2Q9H6S3 715 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 ZNF696Q9H7X3 374 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 EBF2Q9HAK2 575 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 ZNF334Q9HCZ1 680 aaPredicted RBP2.86□□□□□ -1.95
CCDC93-209ENST00000488908 SLC52A1Q9NWF4 448 aa2.86□□□□□ -1.95
CCDC93-209ENST00000488908 MST1RQ04912 1400 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 FAM234BA2RU67 622 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 HNRNPCL2B2RXH8 293 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 APOL1O14791 398 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 PCDH17O14917 1159 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 KPNA5O15131 536 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 EXTL3O43909 919 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 RPP40O75818 363 aaKnown RBP2.85□□□□□ -1.95
CCDC93-209ENST00000488908 PMS2P2O95744 297 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 CH25HO95992 272 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 ANXA6P08133 673 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 CKMT1AP12532 417 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 RPL3P39023 403 aaKnown RBP2.85□□□□□ -1.95
CCDC93-209ENST00000488908 FAM3BP58499 235 aaPredicted RBP2.85□□□□□ -1.95
CCDC93-209ENST00000488908 NLRP5P59047 1200 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 RNASELQ05823 741 aaKnown RBP2.85□□□□□ -1.95
CCDC93-209ENST00000488908 DHX34Q14147 1143 aaKnown RBP2.85□□□□□ -1.95
CCDC93-209ENST00000488908 ZACNQ401N2 412 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 SLC26A9Q7LBE3 791 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 RBFAQ8N0V3 343 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 TXLNBQ8N3L3 684 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 FAR1Q8WVX9 515 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 OR1F2PQ96R84 312 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 IFT27Q9BW83 186 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 BARHL1Q9BZE3 327 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 LHPPQ9H008 270 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 ZFP57Q9NU63 452 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 DDX43Q9NXZ2 648 aaKnown RBP2.85□□□□□ -1.95
CCDC93-209ENST00000488908 SLC25A13Q9UJS0 675 aa2.85□□□□□ -1.95
CCDC93-209ENST00000488908 hCG_2014768A0A024R1R8 64 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 VSTM5A8MXK1 200 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 RASA4BC9J798 803 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 IGHV4-30-4P0DP06 118 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 CETPP11597 493 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 FMO4P31512 558 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 STT3AP46977 705 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 ADORA2A-AS1P86434 159 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 PPP2R5AQ15172 486 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 NCAPH2Q6IBW4 605 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 FBXO38Q6PIJ6 1188 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 C19orf48Q6RUI8 117 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 EPHX4Q8IUS5 362 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 LYG1Q8N1E2 194 aa2.84□□□□□ -1.95
CCDC93-209ENST00000488908 CLK4Q9HAZ1 481 aaKnown RBP2.84□□□□□ -1.95
CCDC93-209ENST00000488908 GOLGA6CA6NDK9 693 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 GOLGA6BA6NDN3 693 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 MBD3L5A6NJ08 208 aaPredicted RBP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 KIF1CO43896 1103 aaKnown RBP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 GOLGA6DP0CG33 693 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 FCGR2AP12318 317 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 GSTM2P28161 218 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 TYK2P29597 1187 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 HSD17B4P51659 736 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 ARL13BQ3SXY8 428 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 SETMARQ53H47 684 aaPredicted RBP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 ODR4Q5SWX8 454 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 ARL6IP4Q66PJ3 421 aaKnown RBP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 RINT1Q6NUQ1 792 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 WDR5BQ86VZ2 330 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms