RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 UBXN2BQ14CS0 331 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 ANKS1BQ7Z6G8 1248 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 SUGP1Q8IWZ8 645 aaKnown RBP19.78■□□□□ 0.76
CCM2-216ENST00000488727 BCAS4Q8TDM0 211 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 SEMA4AQ9H3S1 761 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 CATSPERBQ9H7T0 1116 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 RCOR3Q9P2K3 495 aaPredicted RBP19.78■□□□□ 0.76
CCM2-216ENST00000488727 NUP205Q92621 2012 aa19.78■□□□□ 0.76
CCM2-216ENST00000488727 WASH4PA8MWX3 477 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 K7EQS6 105 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 APODP05090 189 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 AMPD1P23109 780 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 MZF1P28698 734 aaPredicted RBP19.77■□□□□ 0.76
CCM2-216ENST00000488727 CSKP41240 450 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 GUCY1A3Q02108 690 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 GRSF1Q12849 480 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCM2-216ENST00000488727 FZD5Q13467 585 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 SLC29A2Q14542 456 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 LLGL1Q15334 1064 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 FUT11Q495W5 492 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 SETD3Q86TU7 594 aaPredicted RBP19.77■□□□□ 0.76
CCM2-216ENST00000488727 ADIPOR2Q86V24 386 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 CCDC117Q8IWD4 279 aaPredicted RBP19.77■□□□□ 0.76
CCM2-216ENST00000488727 ZNF557Q8N988 423 aaPredicted RBP19.77■□□□□ 0.76
CCM2-216ENST00000488727 ALG14Q96F25 216 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 ZNF670Q9BS34 389 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 HEMGNQ9BXL5 484 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 EPN3Q9H201 632 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 CNOT10Q9H9A5 744 aaKnown RBP19.77■□□□□ 0.76
CCM2-216ENST00000488727 ETNK2Q9NVF9 386 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 KIAA1522Q9P206 1035 aaPredicted RBP19.77■□□□□ 0.76
CCM2-216ENST00000488727 MFHAS1Q9Y4C4 1052 aa19.77■□□□□ 0.76
CCM2-216ENST00000488727 A0A0D9SEW6 157 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 TBC1D3BA6NDS4 549 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 RHOCP08134 193 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 DRD1P21728 446 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 HPDP32754 393 aaPredicted RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 MAPKAPK2P49137 400 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 C6orf118Q5T5N4 469 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 CWF19L1Q69YN2 538 aaKnown RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 TTC19Q6DKK2 380 aaPredicted RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 SPOCD1Q6ZMY3 1216 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 MAP7D3Q8IWC1 876 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 APCDD1Q8J025 514 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 CCDC89Q8N998 374 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 CCHCR1Q8TD31 782 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 FAF2Q96CS3 445 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 CCDC114Q96M63 670 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 KLC2Q9H0B6 622 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 RETREG1Q9H6L5 497 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 NOL6Q9H6R4 1146 aaKnown RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 BCCIPQ9P287 314 aaKnown RBP eCLIP19.76■□□□□ 0.75
CCM2-216ENST00000488727 MRPS17Q9Y2R5 130 aaKnown RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 MYO18AQ92614 2054 aaKnown RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 FAM170BA6NMN3 283 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 STK25O00506 426 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 DCLK1O15075 740 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 TJP3O95049 919 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 CHRM1P11229 460 aaPredicted RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 CHRNB1P11230 501 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 MAGOHP61326 146 aaKnown RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 PLEKHG6Q3KR16 790 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 PREPLQ4J6C6 727 aaPredicted RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 ANKRD20A8PQ5CZ79 823 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 RNF219Q5W0B1 726 aaPredicted RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 MFSD7Q6UXD7 560 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 SRLQ86TD4 932 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 AHI1Q8N157 1196 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 NPWQ8N729 165 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 FLCNQ8NFG4 579 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 PJA1Q8NG27 643 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 PCDH19Q8TAB3 1148 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 FEM1AQ9BSK4 669 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 ROPN1BQ9BZX4 212 aaPredicted RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 MFSD1Q9H3U5 465 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 ROPN1Q9HAT0 212 aaPredicted RBP19.76■□□□□ 0.75
CCM2-216ENST00000488727 LRRC4CQ9HCJ2 640 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 HCN2Q9UL51 889 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 OR51B4Q9Y5P0 310 aa19.76■□□□□ 0.75
CCM2-216ENST00000488727 MUC22E2RYF6 1773 aaPredicted RBP19.75■□□□□ 0.75
CCM2-216ENST00000488727 hCG_1818297A0A087WSY0 165 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 LIASO43766 372 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 ITGA8P53708 1063 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 PITRM1Q5JRX3 1037 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 NELL2Q99435 816 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 FOXP3Q9BZS1 431 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 CDC42EP4Q9H3Q1 356 aaKnown RBP19.75■□□□□ 0.75
CCM2-216ENST00000488727 RSPH14Q9UHP6 348 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 EFR3BQ9Y2G0 817 aa19.75■□□□□ 0.75
CCM2-216ENST00000488727 NYNRINQ9P2P1 1898 aaKnown RBP19.75■□□□□ 0.75
CCM2-216ENST00000488727 ILVBLA1L0T0 632 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 AGTP01019 485 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 CDKN2BP42772 138 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 PLK1P53350 603 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 GNA12Q03113 381 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 TNFAIP8L3Q5GJ75 292 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 MBLAC2Q68D91 279 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 VSIG1Q86XK7 387 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 RELL1Q8IUW5 271 aa19.74■□□□□ 0.75
CCM2-216ENST00000488727 UMODL1-AS1Q8N2C9 162 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms