RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF419Q96HQ0 510 aaPredicted RBP15.35■□□□□ 0.05
CXCL12-207ENST00000488591 CELF6Q96J87 481 aaKnown RBP15.35■□□□□ 0.05
CXCL12-207ENST00000488591 CALR3Q96L12 384 aaKnown RBP15.35■□□□□ 0.05
CXCL12-207ENST00000488591 CSPG4P5Q96PW8 444 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 CALN1Q9BXU9 219 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 SLC39A8Q9C0K1 460 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 PCED1AQ9H1Q7 454 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 TNKS2Q9H2K2 1166 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 LRRC19Q9H756 370 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 VPS45Q9NRW7 570 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 SEMA4GQ9NTN9 838 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 PPM1HQ9ULR3 514 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 FZD4Q9ULV1 537 aa15.35■□□□□ 0.05
CXCL12-207ENST00000488591 FCF1Q9Y324 198 aaKnown RBP15.35■□□□□ 0.05
CXCL12-207ENST00000488591 RIF1Q5UIP0 2472 aaKnown RBP15.35■□□□□ 0.05
CXCL12-207ENST00000488591 NYNRINQ9P2P1 1898 aaKnown RBP15.34■□□□□ 0.05
CXCL12-207ENST00000488591 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-207ENST00000488591 MEI4A8MW99 385 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 DFFAO00273 331 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 CD160O95971 181 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 SERPINB6P35237 376 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 PTGER3P43115 390 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 PAPOLAP51003 745 aaKnown RBP15.34■□□□□ 0.05
CXCL12-207ENST00000488591 HADHBP55084 474 aaKnown RBP15.34■□□□□ 0.05
CXCL12-207ENST00000488591 TAS2R40P59535 323 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 SNRPD1P62314 119 aaKnown RBP15.34■□□□□ 0.05
CXCL12-207ENST00000488591 WDR45BQ5MNZ6 344 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 LEKR1Q6ZMV7 388 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 SYT12Q8IV01 421 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 PLPP6Q8IY26 295 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 KIAA2013Q8IYS2 634 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 RGL4Q8IZJ4 473 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 RYBPQ8N488 228 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-207ENST00000488591 HDDC3Q8N4P3 179 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 TMIEQ8NEW7 156 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 PIP4K2CQ8TBX8 421 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 HSPA12BQ96MM6 686 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 DYRK4Q9NR20 520 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 UBA2Q9UBT2 640 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-207ENST00000488591 IL36AQ9UHA7 158 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 MYO15AQ9UKN7 3530 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 CEP192Q8TEP8 1941 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 OTOGLQ3ZCN5 2332 aa15.34■□□□□ 0.05
CXCL12-207ENST00000488591 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.05
CXCL12-207ENST00000488591 FAM186AA6NE01 2351 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 RALGAPA1Q6GYQ0 2036 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 LRRC72A6NJI9 287 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 METTL12A8MUP2 240 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 SPOPO43791 374 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 SEMA4FO95754 770 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 GSRP00390 522 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF806P0C7X5 589 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 ACSL1P33121 698 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
CXCL12-207ENST00000488591 RAD51Q06609 339 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 ATP13A4Q4VNC1 1196 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 AFMIDQ63HM1 303 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 RAD9BQ6WBX8 426 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 DPY19L3Q6ZPD9 716 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 RABEPKQ7Z6M1 372 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 CPNE8Q86YQ8 564 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 RHOT1Q8IXI2 618 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 C12orf50Q8NA57 414 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-207ENST00000488591 FAM71BQ8TC56 605 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 TSC1Q92574 1164 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 PPP1R16AQ96I34 528 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 HEPHQ9BQS7 1158 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 TM6SF2Q9BZW4 377 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 KLC2Q9H0B6 622 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 NEUROG2Q9H2A3 272 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 SP110Q9HB58 689 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 HECAQ9UBI9 543 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-207ENST00000488591 ACTL7AQ9Y615 435 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 GPR179Q6PRD1 2367 aa15.33■□□□□ 0.04
CXCL12-207ENST00000488591 DMDP11532 3685 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 WDR87Q6ZQQ6 2873 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 EP300Q09472 2414 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 KPNA3O00505 521 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 KHNYNO15037 678 aaKnown RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 SLC7A4O43246 635 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 PRAMEF11O60813 436 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF821O75541 412 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 TMCC1O94876 653 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 POP4O95707 220 aaKnown RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 GNSP15586 552 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 ITPKAP23677 461 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 HOXD12P35452 270 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 ARSEP51690 589 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 CCNHP51946 323 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 RHOAP61586 193 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 DPYSL3Q14195 570 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 CCDC6Q16204 474 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 ARSIQ5FYB1 569 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 PLA2G2CQ5R387 149 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 LRRC38Q5VT99 294 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 KIAA1328Q86T90 577 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 SLC41A1Q8IVJ1 513 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 AADATQ8N5Z0 425 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms