RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 C1QTNF9P0C862 333 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 GLDCP23378 1020 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 RECQLP46063 649 aaPredicted RBP23.6■■□□□ 1.37
CUL4A-209ENST00000488558 ARF5P84085 180 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 NEK5Q6P3R8 708 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 DNAJC24Q6P3W2 148 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 WDR59Q6PJI9 974 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 IQCHQ86VS3 1027 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 DRC7Q8IY82 874 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 PCDH20Q8N6Y1 951 aaKnown RBP23.6■■□□□ 1.37
CUL4A-209ENST00000488558 RHBDD1Q8TEB9 315 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 TBC1D31Q96DN5 1066 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 ELF4Q99607 663 aaPredicted RBP23.6■■□□□ 1.37
CUL4A-209ENST00000488558 SPON2Q9BUD6 331 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 RTN4Q9NQC3 1192 aaKnown RBP23.6■■□□□ 1.37
CUL4A-209ENST00000488558 KLK13Q9UKR3 277 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 KNL1Q8NG31 2342 aa23.6■■□□□ 1.37
CUL4A-209ENST00000488558 ANKRD62A6NC57 917 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 LRIG2O94898 1065 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 ZNF143P52747 638 aaPredicted RBP23.59■■□□□ 1.37
CUL4A-209ENST00000488558 GEMIN4P57678 1058 aaKnown RBP23.59■■□□□ 1.37
CUL4A-209ENST00000488558 TAS2R38P59533 333 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 OVGP1Q12889 678 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 SETMARQ53H47 684 aaPredicted RBP23.59■■□□□ 1.37
CUL4A-209ENST00000488558 PPP1R15BQ5SWA1 713 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 CHCHD4Q8N4Q1 142 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 CCDC185Q8N715 623 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 MFSD2AQ8NA29 543 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 KDF1Q8NAX2 398 aaPredicted RBP23.59■■□□□ 1.37
CUL4A-209ENST00000488558 PPP1R16AQ96I34 528 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 SYT11Q9BT88 431 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 DYRK4Q9NR20 520 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 GDF3Q9NR23 364 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 IL36AQ9UHA7 158 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 CABIN1Q9Y6J0 2220 aa23.59■■□□□ 1.37
CUL4A-209ENST00000488558 AKAP13Q12802 2813 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 KPNA3O00505 521 aaPredicted RBP23.58■■□□□ 1.37
CUL4A-209ENST00000488558 WNT9AO14904 365 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 ZNF821O75541 412 aaPredicted RBP23.58■■□□□ 1.37
CUL4A-209ENST00000488558 DKK1O94907 266 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 PLEKP08567 350 aaPredicted RBP23.58■■□□□ 1.37
CUL4A-209ENST00000488558 AIF1P55008 147 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 NXPH1P58417 271 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 POM121L1PQ3SYA9 428 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 ACAD10Q6JQN1 1059 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 RWDD4Q6NW29 188 aaKnown RBP23.58■■□□□ 1.37
CUL4A-209ENST00000488558 IRF2BP2Q7Z5L9 587 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 PLPP6Q8IY26 295 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 OXR1Q8N573 874 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 CHST14Q8NCH0 376 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 BAP1Q92560 729 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 ISG20Q96AZ6 181 aaKnown RBP23.58■■□□□ 1.37
CUL4A-209ENST00000488558 ARRDC3Q96B67 414 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 HDAC8Q9BY41 377 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 MAGEH1Q9H213 219 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 ERVMER34-1Q9H9K5 563 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 BTBD3Q9Y2F9 522 aa23.58■■□□□ 1.37
CUL4A-209ENST00000488558 A0A1W2PQC6 194 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 FAM72CH0Y354 149 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 TLR4O00206 839 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 KCNK3O14649 394 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 TEX33O43247 280 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 CCP110O43303 1012 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 MAGEC1O60732 1142 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 RNGTTO60942 597 aaKnown RBP23.57■■□□□ 1.36
CUL4A-209ENST00000488558 L1CAMP32004 1257 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 FILIP1LQ4L180 1135 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 FAM72AQ5TYM5 149 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 FAM72DQ6L9T8 149 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 DPY19L3Q6ZPD9 716 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 SLFN11Q7Z7L1 901 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 FAM72BQ86X60 149 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 ARHGEF2Q92974 986 aaKnown RBP23.57■■□□□ 1.36
CUL4A-209ENST00000488558 VCPIP1Q96JH7 1222 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 CNPY3Q9BT09 278 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 TNKS2Q9H2K2 1166 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 NDFIP2Q9NV92 336 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 WASF2Q9Y6W5 498 aa23.57■■□□□ 1.36
CUL4A-209ENST00000488558 PRAMEF26H0Y7S4 382 aa23.56■■□□□ 1.36
CUL4A-209ENST00000488558 CD160O95971 181 aa23.56■■□□□ 1.36
CUL4A-209ENST00000488558 ARRB1P49407 418 aaPredicted RBP23.56■■□□□ 1.36
CUL4A-209ENST00000488558 EFHC2Q5JST6 749 aa23.56■■□□□ 1.36
CUL4A-209ENST00000488558 CAVIN1Q6NZI2 390 aaKnown RBP23.56■■□□□ 1.36
CUL4A-209ENST00000488558 ERN2Q76MJ5 926 aaKnown RBP23.56■■□□□ 1.36
CUL4A-209ENST00000488558 MCOLN2Q8IZK6 566 aa23.56■■□□□ 1.36
CUL4A-209ENST00000488558 GRIN3AQ8TCU5 1115 aa23.56■■□□□ 1.36
CUL4A-209ENST00000488558 MCEEQ96PE7 176 aa23.56■■□□□ 1.36
CUL4A-209ENST00000488558 TOR4AQ9NXH8 423 aa23.56■■□□□ 1.36
CUL4A-209ENST00000488558 TNFSF14O43557 240 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 RAMP2O60895 175 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 LEFTY1O75610 366 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 DESP17661 470 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 ITGB7P26010 798 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 MAT2AP31153 395 aaKnown RBP23.55■■□□□ 1.36
CUL4A-209ENST00000488558 ACVRL1P37023 503 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 ZNF165P49910 485 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 CARD16Q5EG05 197 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 ARSIQ5FYB1 569 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 SLCO6A1Q86UG4 719 aa23.55■■□□□ 1.36
CUL4A-209ENST00000488558 HEPHQ9BQS7 1158 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms