RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SNX11Q9Y5W9 270 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 ACTL7AQ9Y615 435 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3DA0A087WVF3 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3IA0A087WXS9 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3EA0A087X179 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3KA0A087X1G2 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 A0A1W2PQJ5 194 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3FA6NER0 549 aaPredicted RBP18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3LB9A6J9 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 CREB3O43889 395 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 SH3BP5O60239 455 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 PRNPP04156 253 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3HP0C7X1 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 DNA2P51530 1060 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 AIF1P55008 147 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 RACK1P63244 317 aaKnown RBP18.11■□□□□ 0.49
ITGB1-215ENST00000488494 KCNT1Q5JUK3 1230 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 PIP5KL1Q5T9C9 394 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3GQ6DHY5 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3CQ6IPX1 549 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 DPY19L3Q6ZPD9 716 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TBC1D3Q8IZP1 549 aaPredicted RBP18.11■□□□□ 0.49
ITGB1-215ENST00000488494 PCDH20Q8N6Y1 951 aaKnown RBP18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TM6SF2Q9BZW4 377 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 TRIM7Q9C029 511 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 RETREG1Q9H6L5 497 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 GPATCH2LQ9NWQ4 482 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 IFNKQ9P0W0 207 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 CNOT8Q9UFF9 292 aaKnown RBP18.11■□□□□ 0.49
ITGB1-215ENST00000488494 IL36AQ9UHA7 158 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 FRYQ5TBA9 3013 aa18.11■□□□□ 0.49
ITGB1-215ENST00000488494 RNF103O00237 685 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 LATO43561 262 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 ZNF821O75541 412 aaPredicted RBP18.1■□□□□ 0.49
ITGB1-215ENST00000488494 GZMAP12544 262 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 MAT2AP31153 395 aaKnown RBP18.1■□□□□ 0.49
ITGB1-215ENST00000488494 C21orf59P57076 290 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 SIM1P81133 766 aaPredicted RBP18.1■□□□□ 0.49
ITGB1-215ENST00000488494 SLC20A2Q08357 652 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 FOXC1Q12948 553 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 POLD3Q15054 466 aaPredicted RBP18.1■□□□□ 0.49
ITGB1-215ENST00000488494 LEKR1Q6ZMV7 388 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 TMIEQ8NEW7 156 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 ARRDC3Q96B67 414 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 TRIM11Q96F44 468 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 SERAC1Q96JX3 654 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 MAGEH1Q9H213 219 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 KDM4CQ9H3R0 1056 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 DYRK4Q9NR20 520 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 TM7SF3Q9NS93 570 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 TPX2Q9ULW0 747 aaKnown RBP18.1■□□□□ 0.49
ITGB1-215ENST00000488494 HPCAL4Q9UM19 191 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 SCINQ9Y6U3 715 aa18.1■□□□□ 0.49
ITGB1-215ENST00000488494 TMEM191CA6NGB0 347 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 VILLO15195 856 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 LEFTY1O75610 366 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 CD160O95971 181 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 ZNF883P0CG24 379 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 CCNHP51946 323 aaPredicted RBP18.09■□□□□ 0.49
ITGB1-215ENST00000488494 GEMIN4P57678 1058 aaKnown RBP18.09■□□□□ 0.49
ITGB1-215ENST00000488494 TAS2R38P59533 333 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 FAM193AP78312 1265 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 SKOR2Q2VWA4 1001 aaPredicted RBP18.09■□□□□ 0.49
ITGB1-215ENST00000488494 ARSIQ5FYB1 569 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 HGSNATQ68CP4 663 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 TRIM69Q86WT6 500 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 ZNF354CQ86Y25 554 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 PPP1R16AQ96I34 528 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 CNTNAP3BQ96NU0 1288 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 CNTNAP3Q9BZ76 1288 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 NOL6Q9H6R4 1146 aaKnown RBP18.09■□□□□ 0.49
ITGB1-215ENST00000488494 ZDHHC6Q9H6R6 413 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 PREBQ9HCU5 417 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 MYO1AQ9UBC5 1043 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 AP4E1Q9UPM8 1137 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 WASF2Q9Y6W5 498 aa18.09■□□□□ 0.49
ITGB1-215ENST00000488494 TP53BP1Q12888 1972 aaPredicted RBP18.09■□□□□ 0.49
ITGB1-215ENST00000488494 CHD5Q8TDI0 1954 aa18.08■□□□□ 0.49
ITGB1-215ENST00000488494 ACACBO00763 2458 aa18.08■□□□□ 0.49
ITGB1-215ENST00000488494 TMEM131Q92545 1883 aa18.08■□□□□ 0.49
ITGB1-215ENST00000488494 H0Y8X5 98 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 WNT9AO14904 365 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 WNT1P04628 370 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 GYPCP04921 128 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 MYBL1P10243 752 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 CTSKP43235 329 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 CCT8P50990 548 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 TPI1P60174 286 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 ZBED6P86452 979 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 SHC2P98077 582 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 CARD16Q5EG05 197 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 NAPEPLDQ6IQ20 393 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 OR6K2Q8NGY2 324 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 CPLX3Q8WVH0 158 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 SYN2Q92777 582 aaPredicted RBP18.08■□□□□ 0.48
ITGB1-215ENST00000488494 HMCESQ96FZ2 354 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 PEBP4Q96S96 227 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.08■□□□□ 0.48
ITGB1-215ENST00000488494 CATSPERBQ9H7T0 1116 aa18.08■□□□□ 0.48
ITGB1-215ENST00000488494 PCSK1NQ9UHG2 260 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms