RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SEMA4BQ9NPR2 832 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 TMEM45AQ9NWC5 275 aa3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 SLC13A4Q9UKG4 626 aa3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 TBX20Q9UMR3 447 aa3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 SLC8A2Q9UPR5 921 aa3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 ICKQ9UPZ9 632 aa3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 LAMP3Q9UQV4 416 aa3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 TNFSF13BQ9Y275 285 aa3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 TTBK1Q5TCY1 1321 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-219ENST00000488035 TRBV5-3A0A0A0MS03 114 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 TRBV5-7A0A0A0MS05 114 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 EME2A4GXA9 379 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 FAM90A8PA6NJQ4 464 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 A6NNC1 897 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 FOXO6A8MYZ6 492 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 PRSS44E7EML9 344 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 CBX6O95503 412 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 TBX18O95935 607 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 URODP06132 367 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 FAM90A13PP0C7W8 464 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 FAM90A24PP0C7X0 464 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 TNNT1P13805 278 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 KLRC2P26717 231 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 EFNA5P52803 228 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 OAZ1P54368 228 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 SLC12A2P55011 1212 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 GHRHRQ02643 423 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 TBL3Q12788 808 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 TBX2Q13207 712 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 GPR68Q15743 365 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 RPE65Q16518 533 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 SLC18A3Q16572 532 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 SMTNL2Q2TAL5 461 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 PRICKLE4Q2TBC4 344 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 C5orf22Q49AR2 442 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 SYTL3Q4VX76 610 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 ENTPD8Q5MY95 495 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 TBC1D9BQ66K14 1250 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 LRIG3Q6UXM1 1119 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 ZNF793Q6ZN11 406 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 FAM57BQ71RH2 274 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 CYB5R4Q7L1T6 521 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 LRRC8DQ7L1W4 858 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 ADGRG6Q86SQ4 1221 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 GPSM1Q86YR5 675 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 TCP11L2Q8N4U5 519 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 NRACQ8N912 160 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 PCYOX1LQ8NBM8 494 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 CMASQ8NFW8 434 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 RFWD2Q8NHY2 731 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 ZNF419Q96HQ0 510 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 APOPT1Q96IL0 206 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 VCPIP1Q96JH7 1222 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 NAP1L4Q99733 375 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 SLC26A6Q9BXS9 759 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 SLC25A18Q9H1K4 315 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 HIPK3Q9H422 1215 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 PAPOLBQ9NRJ5 636 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 ZNF69Q9UC07 566 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 PLEKHB1Q9UF11 243 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 IPO11Q9UI26 975 aaKnown RBP3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 NAALADL1Q9UQQ1 740 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 CNPY2Q9Y2B0 182 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 CYP46A1Q9Y6A2 500 aa3.1□□□□□ -1.91
R3HDM1-219ENST00000488035 KIR2DS5A0A0G2JLQ3 304 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 PABPN1LA6NDY0 278 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 DDTLA6NHG4 134 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 KIR2DS3K7RE56 304 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 TNPO2O14787 897 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 LDLRAD4O15165 306 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 SPTLC2O15270 562 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 EPB41L2O43491 1005 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CCNT1O60563 726 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 TLR2O60603 784 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 MBD4O95243 580 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 F9P00740 461 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ADAP00813 363 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ALPLP05186 524 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CD63P08962 238 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 IFIT1P09914 478 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CHRNB1P11230 501 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 EDN2P20800 178 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CHRNA5P30532 468 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CIITAP33076 1130 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CYP2J2P51589 502 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 RPS13P62277 151 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 RPP30P78346 268 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ID2Q02363 134 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 GOLGA8FQ08AF8 430 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 PMPCAQ10713 525 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 SIM2Q14190 667 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ERV3-1Q14264 604 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 BAK1Q16611 211 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ME3Q16798 604 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ODF3L2Q3SX64 289 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 PLK5Q496M5 336 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ZNF766Q5HY98 468 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 VWA5B1Q5TIE3 1220 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ACAD10Q6JQN1 1059 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms