RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZNF252P-AS1Q0IIN9 211 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CTBP1Q13363 440 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 AGKQ53H12 422 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 NCBP2-AS2Q69YL0 99 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 SNX32Q86XE0 403 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 LPCAT1Q8NF37 534 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 KCTD4Q8WVF5 259 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 NTAN1Q96AB6 310 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 ADAM7Q9H2U9 754 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 POMKQ9H5K3 350 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 DTNAQ9Y4J8 743 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 TEX264Q9Y6I9 313 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 HCRTO43612 131 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CNMDO75829 334 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 WNT3AP56704 352 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 RAB10P61026 200 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 TMEM63BQ5T3F8 832 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 LRRC74BQ6ZQY2 392 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 DEFB128Q7Z7B8 93 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 PIWIL1Q96J94 861 aaKnown RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CCDC138Q96M89 665 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 APOL5Q9BWW9 433 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 ARL8BQ9NVJ2 186 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 TAS2R13Q9NYV9 303 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 IGSF9Q9P2J2 1179 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 FAM8A1Q9UBU6 413 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CHKBQ9Y259 395 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 HBS1LQ9Y450 684 aaKnown RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 TMEM114B3SHH9 223 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 SEPT4O43236 478 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 PQBP1O60828 265 aaKnown RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 E2F6O75461 281 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 PSMG1O95456 288 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 FAM163BP0C2L3 166 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 GLUD2P49448 558 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CLCN5P51795 746 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 C6orf89Q6UWU4 347 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 IZUMO2Q6UXV1 221 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 MARK2Q7KZI7 788 aaKnown RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 MFSD3Q96ES6 412 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CAB39LQ9H9S4 337 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CHRAC1Q9NRG0 131 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 PGAP2Q9UHJ9 254 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 CRYL1Q9Y2S2 319 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 Q9Y3F1 56 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 NR2E3Q9Y5X4 410 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 MAGEA13PA6NCF6 341 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 NCF1BA6NI72 391 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 NCF1CA8MVU1 366 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 HDAC3O15379 428 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 PDE5AO76074 875 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 LRG1P02750 347 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 OR4Q2P0C623 313 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 NCF1P14598 390 aaPredicted RBP11.98□□□□□ -0.49
TRA2B-214ENST00000487615 GRIA4P48058 902 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 MAXP61244 160 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 KCNA10Q16322 511 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 SPDYAQ5MJ70 313 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 SLC24A5Q71RS6 500 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 HERC6Q8IVU3 1022 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 GALNT4Q8N4A0 578 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 RDH11Q8TC12 318 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 SMPD4Q9NXE4 827 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 SLC12A4Q9UP95 1085 aa11.98□□□□□ -0.49
TRA2B-214ENST00000487615 USP1O94782 785 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 LTA4HP09960 611 aaKnown RBP11.97□□□□□ -0.49
TRA2B-214ENST00000487615 ATP5F1P24539 256 aaPredicted RBP11.97□□□□□ -0.49
TRA2B-214ENST00000487615 MSLNQ13421 630 aaPredicted RBP11.97□□□□□ -0.49
TRA2B-214ENST00000487615 ARHGEF7Q14155 803 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 TTLL9Q3SXZ7 439 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 TIGD5Q53EQ6 642 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 TCHHL1Q5QJ38 904 aaPredicted RBP11.97□□□□□ -0.49
TRA2B-214ENST00000487615 LDLRAD1Q5T700 205 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 OTOP3Q7RTS5 596 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 PIWIL4Q7Z3Z4 852 aaKnown RBP11.97□□□□□ -0.49
TRA2B-214ENST00000487615 PQLC3Q8N755 202 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 SEMA3CQ99985 751 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 CLPBQ9H078 707 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 ANLNQ9NQW6 1124 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 PIGVQ9NUD9 493 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■■■■□ 21.3
TRA2B-214ENST00000487615 COPG2Q9UBF2 871 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 XPR1Q9UBH6 696 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 LRCH1Q9Y2L9 728 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 RAP2CQ9Y3L5 183 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 A0A1W2PQH9 124 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 ADCY6O43306 1168 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 CCDC166P0CW27 439 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 HTR7P34969 479 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 RABGGTBP53611 331 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 LIMK2P53671 638 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 EPHB3P54753 998 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 LIPMQ5VYY2 423 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 FAM13CQ8NE31 585 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 DDI1Q8WTU0 396 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 KCTD13Q8WZ19 329 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 OR6C75A6NL08 312 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 CLASP2O75122 1294 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms