RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 SLC44A2Q8IWA5 706 aaPredicted RBP3.87□□□□□ -1.79
RBM39-234ENST00000487604 SCN4BQ8IWT1 228 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 TCP11L2Q8N4U5 519 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 TEX45Q8NA69 505 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 SCAMP5Q8TAC9 235 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 FAR1Q8WVX9 515 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 ARRDC3Q96B67 414 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 FRG2BQ96QU4 278 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 RETREG1Q9H6L5 497 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 PRDM8Q9NQV8 689 aa3.87□□□□□ -1.79
RBM39-234ENST00000487604 IGLV5-52A0A0A0MRZ9 124 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 IGHV4-28A0A0C4DH34 117 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 LINC01553A4QN01 128 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 SLC16A5O15375 505 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 ACTL6BO94805 426 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 CLDN7O95471 211 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 ITGA2BP08514 1039 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 CLCNKBP51801 687 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 TUBA1BP68363 451 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 BTKQ06187 659 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 HLFQ16534 295 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 ZNF672Q499Z4 452 aaPredicted RBP3.86□□□□□ -1.79
RBM39-234ENST00000487604 GXYLT1Q4G148 440 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 TTC22Q5TAA0 569 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 MON1BQ7L1V2 547 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 RAB11FIP2Q7L804 512 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 SERPINA11Q86U17 422 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 PALB2Q86YC2 1186 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 MIGA1Q8NAN2 632 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 DUX5Q96PT3 197 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 PIGSQ96S52 555 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 ARFGAP3Q9NP61 516 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 KLQ9UEF7 1012 aa3.86□□□□□ -1.79
RBM39-234ENST00000487604 AGO1Q9UL18 857 aaKnown RBP3.86□□□□□ -1.79
RBM39-234ENST00000487604 C19orf53Q9UNZ5 99 aaPredicted RBP3.86□□□□□ -1.79
RBM39-234ENST00000487604 SRPRBQ9Y5M8 271 aaKnown RBP3.86□□□□□ -1.79
RBM39-234ENST00000487604 LOC102724159A0A0B4J2E5 919 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 EYA2O00167 538 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 ITM2AO43736 263 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 DLX5P56178 289 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 POU5F1BQ06416 359 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 GALNT1Q10472 559 aaPredicted RBP3.85□□□□□ -1.79
RBM39-234ENST00000487604 MYBPC2Q14324 1141 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 SLC39A14Q15043 492 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 PWP2Q15269 919 aaKnown RBP3.85□□□□□ -1.79
RBM39-234ENST00000487604 PFKFB4Q16877 469 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 LRRC24Q50LG9 513 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 TMEM268Q5VZI3 342 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 TBC1D9BQ66K14 1250 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 WBP2NLQ6ICG8 309 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 WDR5BQ86VZ2 330 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 ZNF527Q8NB42 609 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 IFT27Q9BW83 186 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 CADM1Q9BY67 442 aaKnown RBP3.85□□□□□ -1.79
RBM39-234ENST00000487604 PABPC3Q9H361 631 aaKnown RBP3.85□□□□□ -1.79
RBM39-234ENST00000487604 ELAC1Q9H777 363 aaKnown RBP3.85□□□□□ -1.79
RBM39-234ENST00000487604 ACAD9Q9H845 621 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 CHST12Q9NRB3 414 aa3.85□□□□□ -1.79
RBM39-234ENST00000487604 HERC5Q9UII4 1024 aaKnown RBP3.85□□□□□ -1.79
RBM39-234ENST00000487604 ERRFI1Q9UJM3 462 aaPredicted RBP3.85□□□□□ -1.79
RBM39-234ENST00000487604 SYN3O14994 580 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 HNRNPRO43390 633 aaKnown RBP3.84□□□□□ -1.79
RBM39-234ENST00000487604 MYL1P05976 194 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 MMP3P08254 477 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 SNRNP70P08621 437 aaKnown RBP3.84□□□□□ -1.79
RBM39-234ENST00000487604 CHN1P15882 459 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 RFC1P35251 1148 aaPredicted RBP3.84□□□□□ -1.79
RBM39-234ENST00000487604 DPP6P42658 865 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 AP2B1P63010 937 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 POU3F1Q03052 451 aaPredicted RBP3.84□□□□□ -1.79
RBM39-234ENST00000487604 RPS6KA2Q15349 733 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 XRRA1Q6P2D8 792 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 GALNT7Q86SF2 657 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 BRSK2Q8IWQ3 736 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 RBFAQ8N0V3 343 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 LILRB1Q8NHL6 650 aaPredicted RBP3.84□□□□□ -1.79
RBM39-234ENST00000487604 CPT1BQ92523 772 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 TMEM18Q96B42 140 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 PKP4Q99569 1192 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 LHPPQ9H008 270 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 NLRC4Q9NPP4 1024 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 UPB1Q9UBR1 384 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 KCND3Q9UK17 655 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 BAG5Q9UL15 447 aa3.84□□□□□ -1.79
RBM39-234ENST00000487604 A0A087WV62 115 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 TARSL2A2RTX5 802 aaKnown RBP3.83□□□□□ -1.8
RBM39-234ENST00000487604 C17orf100A8MU93 164 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 SERPINI2O75830 405 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 KRT36O76013 467 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 CYP4B1P13584 511 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 ACP5P13686 325 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 ARSAP15289 507 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 SERPINA4P29622 427 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 PDIA3P30101 505 aaKnown RBP3.83□□□□□ -1.8
RBM39-234ENST00000487604 MXI1P50539 228 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 ILF3Q12906 894 aaKnown RBP eCLIP3.83□□□□□ -1.81e-8■■■■□ 21.2
RBM39-234ENST00000487604 CTTNQ14247 550 aaKnown RBP3.83□□□□□ -1.8
RBM39-234ENST00000487604 DGAT2L7PQ6IED9 249 aa3.83□□□□□ -1.8
RBM39-234ENST00000487604 LIN54Q6MZP7 749 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms