RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 RABEPKQ7Z6M1 372 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 STK40Q8N2I9 435 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 RNF10Q8N5U6 811 aaKnown RBP14.92□□□□□ -0.02
LIMS3-205ENST00000487150 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
LIMS3-205ENST00000487150 SUMF1Q8NBK3 374 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 KIAA1524Q8TCG1 905 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 GANCQ8TET4 914 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 RUBCNQ92622 972 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 OSBPL1AQ9BXW6 950 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 BTBD1Q9H0C5 482 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 CYP8B1Q9UNU6 501 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 REXO2Q9Y3B8 237 aaKnown RBP14.92□□□□□ -0.02
LIMS3-205ENST00000487150 ALG6Q9Y672 507 aa14.92□□□□□ -0.02
LIMS3-205ENST00000487150 CCDC66A2RUB6 948 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 PRR23AA6NEV1 266 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 TMCC1O94876 653 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 MT-CO1P00395 513 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 PTMAP06454 111 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 AMPD1P23109 780 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 GLDCP23378 1020 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 KDELR1P24390 212 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 HSPA9P38646 679 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 PSMD8P48556 350 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 PAPOLAP51003 745 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 RHOAP61586 193 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 RPL6Q02878 288 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 TFDP2Q14188 446 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 PLK5Q496M5 336 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 ANKRD20A8PQ5CZ79 823 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 SYCP2LQ5T4T6 812 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 TIGD7Q6NT04 549 aaPredicted RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 BZW1Q7L1Q6 419 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 MMAAQ8IVH4 418 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 KATNAL2Q8IYT4 538 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 NPWQ8N729 165 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 TMIEQ8NEW7 156 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 CADM4Q8NFZ8 388 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 OR2AP1Q8NGE2 309 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 OR2A12Q8NGT7 310 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 CELF6Q96J87 481 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 OMDQ99983 421 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 HINFPQ9BQA5 517 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 DESI2Q9BSY9 194 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 DUSP15Q9H1R2 295 aaPredicted RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 IL36AQ9UHA7 158 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 IPO11Q9UI26 975 aaKnown RBP14.91□□□□□ -0.02
LIMS3-205ENST00000487150 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
LIMS3-205ENST00000487150 MACROD2A1Z1Q3 448 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 MIF4GDA9UHW6 222 aaKnown RBP14.9□□□□□ -0.02
LIMS3-205ENST00000487150 APOL1O14791 398 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 BNIP3LO60238 219 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 GFRA3O60609 400 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
LIMS3-205ENST00000487150 CHRNA3P32297 505 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 SLC8A1P32418 973 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 NUMBP49757 651 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 DNA2P51530 1060 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 RENBPP51606 427 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 SRSF5Q13243 272 aaKnown RBP14.9□□□□□ -0.02
LIMS3-205ENST00000487150 PAFAH1B3Q15102 231 aaKnown RBP14.9□□□□□ -0.02
LIMS3-205ENST00000487150 CARD16Q5EG05 197 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 LYSMD4Q5XG99 296 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 ZNF662Q6ZS27 426 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 ZSCAN30Q86W11 494 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 CACUL1Q86Y37 369 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 ARHGAP12Q8IWW6 846 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 FAM160A2Q8N612 972 aaPredicted RBP14.9□□□□□ -0.02
LIMS3-205ENST00000487150 UBL4BQ8N7F7 174 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 RLN3Q8WXF3 142 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 RNF157Q96PX1 679 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 HEPHQ9BQS7 1158 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 CINPQ9BW66 212 aaPredicted RBP14.9□□□□□ -0.02
LIMS3-205ENST00000487150 SLC39A8Q9C0K1 460 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 LACRTQ9GZZ8 138 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 KLC2Q9H0B6 622 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 KDM4CQ9H3R0 1056 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 PDFQ9HBH1 243 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 KLHL11Q9NVR0 708 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 FBXL12Q9NXK8 326 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 SEPT3Q9UH03 358 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 PPM1HQ9ULR3 514 aa14.9□□□□□ -0.02
LIMS3-205ENST00000487150 FCF1Q9Y324 198 aaKnown RBP14.9□□□□□ -0.02
LIMS3-205ENST00000487150 RCCD1A6NED2 376 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 LRRC72A6NJI9 287 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 K7ERQ8 282 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 MID1O15344 667 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 PALMO75781 387 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 RNASEH2AO75792 299 aaKnown RBP14.89□□□□□ -0.03
LIMS3-205ENST00000487150 EPN2O95208 641 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 POP4O95707 220 aaKnown RBP14.89□□□□□ -0.03
LIMS3-205ENST00000487150 CD48P09326 243 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 VAV1P15498 845 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 CTNNA1P35221 906 aaKnown RBP14.89□□□□□ -0.03
LIMS3-205ENST00000487150 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
LIMS3-205ENST00000487150 COPS2P61201 443 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 ZNF33AQ06730 810 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 TFDP3Q5H9I0 405 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 WDR45BQ5MNZ6 344 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 NCBP2-AS2Q69YL0 99 aa14.89□□□□□ -0.03
LIMS3-205ENST00000487150 PEX26Q7Z412 305 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms