RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	EIF4H	Q15056	248 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	PDK2	Q15119	407 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	DPYSL2	Q16555	572 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	DUOXA1	Q1HG43	343 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	SPDYC	Q5MJ68	293 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	FAM72A	Q5TYM5	149 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	FAM72D	Q6L9T8	149 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	LRRC31	Q6UY01	552 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC36A4	Q6YBV0	504 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	FAM72B	Q86X60	149 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	MAP7D3	Q8IWC1	876 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	LGI2	Q8N0V4	545 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	MINDY1	Q8N5J2	469 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	SORCS1	Q8WY21	1168 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	TMA16	Q96EY4	203 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	RBM41	Q96IZ5	413 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	C1orf74	Q96LT6	269 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	HSPA12B	Q96MM6	686 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	EPAS1	Q99814	870 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	CALN1	Q9BXU9	219 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	SLC32A1	Q9H598	525 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	CAPN10	Q9HC96	672 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	VANGL2	Q9ULK5	521 aa		13.4	□□□□□ -0.26
NR1H3-223	ENST00000486991	TYW5	A2RUC4	315 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991		E9PAM4	449 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991		H3BRJ5	948 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	KIF2A	O00139	706 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	EEF2K	O00418	725 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	DAPK3	O43293	454 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	SERPINF2	P08697	491 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	PYGM	P11217	842 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	CD59	P13987	128 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	GOT1	P17174	413 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	IL12RB1	P42701	662 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	ATXN3	P54252	364 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	TPI1	P60174	286 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	RPS24	P62847	133 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	MMRN1	Q13201	1228 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF211	Q13398	564 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	DPYSL3	Q14195	570 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	MPP7	Q5T2T1	576 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	ARTN	Q5T4W7	220 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	RWDD4	Q6NW29	188 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	FBXL22	Q6P050	247 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	ADIPOR2	Q86V24	386 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	RCOR2	Q8IZ40	523 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	EXD1	Q8NHP7	514 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF592	Q92610	1267 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	TBC1D31	Q96DN5	1066 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	RPRD1A	Q96P16	312 aa	Predicted RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	PRMT1	Q99873	361 aa	Known RBP	13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	STON1	Q9Y6Q2	735 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	CABIN1	Q9Y6J0	2220 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	PCNX2	A6NKB5	2137 aa		13.39	□□□□□ -0.27
NR1H3-223	ENST00000486991	LAMA5	O15230	3695 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	SH3BP5	O60239	455 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	LRIG2	O94898	1065 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	C7	P10643	843 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	PRKCH	P24723	683 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	EPHB2	P29323	1055 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	CXCR5	P32302	372 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	CD70	P32970	193 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	CETN2	P41208	172 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	ARSE	P51690	589 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	NRG1	Q02297	640 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	COL9A2	Q14055	689 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF234	Q14588	700 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	LLGL1	Q15334	1064 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	PTPRN	Q16849	979 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	RABGAP1L	Q5R372	815 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	SEL1L2	Q5TEA6	688 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	DCAF12L1	Q5VU92	463 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	AADACL2	Q6P093	401 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	MFSD7	Q6UXD7	560 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	SPOCD1	Q6ZMY3	1216 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	CIR1	Q86X95	450 aa	Predicted RBP	13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	RGL4	Q8IZJ4	473 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	CFAP52	Q8N1V2	620 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	HDDC3	Q8N4P3	179 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	PNPLA1	Q8N8W4	532 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	FAM71B	Q8TC56	605 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	WFIKKN2	Q8TEU8	576 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	IGSF8	Q969P0	613 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	MRGPRX1	Q96LB2	322 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	ABCB8	Q9NUT2	735 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	ELOVL2	Q9NXB9	296 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	CWC15	Q9P013	229 aa	Known RBP	13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	STIM2	Q9P246	746 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	INTS6	Q9UL03	887 aa	Known RBP	13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	NEUROG3	Q9Y4Z2	214 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	PKD1L2	Q7Z442	2459 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	FAM208B	Q5VWN6	2430 aa		13.38	□□□□□ -0.27
NR1H3-223	ENST00000486991	C3orf70	A6NLC5	250 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	TAF4	O00268	1085 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	ARHGAP33	O14559	1287 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms