RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 ITFG2Q969R8 447 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 IQCDQ96DY2 449 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 PCED1BQ96HM7 432 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 PABPC3Q9H361 631 aaKnown RBP8.71□□□□□ -1.02
APTX-228ENST00000486724 CRTAC1Q9NQ79 661 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 PRSS16Q9NQE7 514 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 FBXL12Q9NXK8 326 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 GDAP2Q9NXN4 497 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 RBAKQ9NYW8 714 aaPredicted RBP8.71□□□□□ -1.02
APTX-228ENST00000486724 NCKIPSDQ9NZQ3 722 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 GGA2Q9UJY4 613 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 SIK3Q9Y2K2 1263 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 SNX9Q9Y5X1 595 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 U3KQA8 63 aa8.71□□□□□ -1.02
APTX-228ENST00000486724 RP1L1Q8IWN7 2480 aaPredicted RBP8.71□□□□□ -1.02
APTX-228ENST00000486724 SPG11Q96JI7 2443 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 LRRIQ3A6PVS8 624 aaPredicted RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 C10orf142B7Z368 130 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 NVLO15381 856 aaKnown RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 TLR5O60602 858 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 SHOX2O60902 331 aaPredicted RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 GYPCP04921 128 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 SLC6A4P31645 630 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 GTF2H1P32780 548 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 FMO5P49326 533 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 ACOT2P49753 483 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 PDX1P52945 283 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 DLG4P78352 724 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 CLDN10P78369 228 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 ZNF177Q13360 481 aaPredicted RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 FIGNQ5HY92 759 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 FYB2Q5VWT5 728 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 TMEM215Q68D42 235 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 SV2AQ7L0J3 742 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 KIAA1328Q86T90 577 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 NT5DC4Q86YG4 428 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 SLC34A3Q8N130 599 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 FBXO39Q8N4B4 442 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 WDR48Q8TAF3 677 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 MYCBPAPQ8TBZ2 947 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 RNF217Q8TC41 542 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 NANOS1Q8WY41 292 aaKnown RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 P2RY11Q96G91 374 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 SGSM3Q96HU1 749 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 CGRRF1Q99675 332 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 SH3GL3Q99963 347 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 PAIP2Q9BPZ3 127 aaKnown RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 DUSP23Q9BVJ7 150 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 TTYH3Q9C0H2 523 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 ELOVL4Q9GZR5 314 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 PDE11AQ9HCR9 933 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 BATF3Q9NR55 127 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 SERGEFQ9UGK8 458 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 CHORDC1Q9UHD1 332 aaPredicted RBP8.7□□□□□ -1.02
APTX-228ENST00000486724 MCM8Q9UJA3 840 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 FZD4Q9ULV1 537 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 PLA2G4CQ9UP65 541 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 AGAP1Q9UPQ3 857 aa8.7□□□□□ -1.02
APTX-228ENST00000486724 A0A1W2PQJ5 194 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 CPED1A4D0V7 1026 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 NEMP2A6NFY4 417 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 LATO43561 262 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 MFAP3LO75121 409 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 RNASEH2AO75792 299 aaKnown RBP8.69□□□□□ -1.02
APTX-228ENST00000486724 PIAS2O75928 621 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 KIAA0754O94854 1291 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 IL18RAPO95256 599 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 ITGB3P05106 788 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 ZDHHC11BP0C7U3 371 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 UGT1A5P35504 534 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 MXI1P50539 228 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 CACNA2D1P54289 1103 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 SLC8A3P57103 927 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 PPP3CAQ08209 521 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 SURF1Q15526 300 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 CDKN3Q16667 212 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 SOWAHAQ2M3V2 549 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 CBWD6Q4V339 395 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 LACTB2Q53H82 288 aaPredicted RBP8.69□□□□□ -1.02
APTX-228ENST00000486724 MDH1BQ5I0G3 518 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 CBWD3Q5JTY5 395 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 CBWD5Q5RIA9 395 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 WLSQ5T9L3 541 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 ZCCHC8Q6NZY4 707 aaKnown RBP8.69□□□□□ -1.02
APTX-228ENST00000486724 Q6ZNB5 142 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 RAB11FIP2Q7L804 512 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 EFL1Q7Z2Z2 1120 aaKnown RBP8.69□□□□□ -1.02
APTX-228ENST00000486724 YTHDF3Q7Z739 585 aaKnown RBP8.69□□□□□ -1.02
APTX-228ENST00000486724 EFCAB3Q8N7B9 438 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 HEXIM2Q96MH2 286 aaKnown RBP8.69□□□□□ -1.02
APTX-228ENST00000486724 SLC12A9Q9BXP2 914 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 RSPH9Q9H1X1 276 aaPredicted RBP8.69□□□□□ -1.02
APTX-228ENST00000486724 TMEM8AQ9HCN3 771 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 PLCB1Q9NQ66 1216 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 DAAM1Q9Y4D1 1078 aa8.69□□□□□ -1.02
APTX-228ENST00000486724 PRRC2CQ9Y520 2896 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms