RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SF3A2Q15428 464 aaKnown RBP18.56■□□□□ 0.56
COL1A1-207ENST00000486572 WDR45BQ5MNZ6 344 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 PIP4K2CQ8TBX8 421 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 ISG20Q96AZ6 181 aaKnown RBP18.56■□□□□ 0.56
COL1A1-207ENST00000486572 TMEM74BQ9NUR3 256 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 ACTL7AQ9Y615 435 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 CEP192Q8TEP8 1941 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 RALGAPA1Q6GYQ0 2036 aa18.56■□□□□ 0.56
COL1A1-207ENST00000486572 METTL12A8MUP2 240 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 BUB1O43683 1085 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 ZNF821O75541 412 aaPredicted RBP18.55■□□□□ 0.56
COL1A1-207ENST00000486572 LCA5LO95447 670 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 FECHP22830 423 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 CHRNA3P32297 505 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 CYLC1P35663 651 aaPredicted RBP18.55■□□□□ 0.56
COL1A1-207ENST00000486572 DCAF12L1Q5VU92 463 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 TCEAL6Q6IPX3 200 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 LEKR1Q6ZMV7 388 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 DPY19L3Q6ZPD9 716 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 POLNQ7Z5Q5 900 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 RABEPKQ7Z6M1 372 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 CPNE8Q86YQ8 564 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 HDDC3Q8N4P3 179 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 CASKIN2Q8WXE0 1202 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 TCEAL3Q969E4 200 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 CELF6Q96J87 481 aaKnown RBP18.55■□□□□ 0.56
COL1A1-207ENST00000486572 CSPG4P5Q96PW8 444 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 KLC2Q9H0B6 622 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 NEUROG2Q9H2A3 272 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 PCDH18Q9HCL0 1135 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 SARDHQ9UL12 918 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 CFAP54Q96N23 3096 aa18.55■□□□□ 0.56
COL1A1-207ENST00000486572 ARHGAP42A6NI28 874 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 TMEM110-MUSTN1A8MSY1 372 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 PRR5-ARHGAP8B1AHC4 643 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 KHNYNO15037 678 aaKnown RBP18.54■□□□□ 0.56
COL1A1-207ENST00000486572 PRNPP04156 253 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 CTSLP07711 333 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 DRD3P35462 400 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 GJC1P36383 396 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 ARHGAP25P42331 645 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 MAGEA1P43355 309 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 DNA2P51530 1060 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 METAP1P53582 386 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 CDH6P55285 790 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 ARHGAP8P85298 464 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 KRT81Q14533 505 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 MESDQ14696 234 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 TCEAL1Q15170 157 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 SPA17Q15506 151 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 AASDHQ4L235 1098 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-207ENST00000486572 CARD16Q5EG05 197 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 AFMIDQ63HM1 303 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 TMTC1Q8IUR5 882 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 RGL4Q8IZJ4 473 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 LZTR1Q8N653 840 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 NPWQ8N729 165 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 CHST14Q8NCH0 376 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 TMIEQ8NEW7 156 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 GRIN3AQ8TCU5 1115 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 TM6SF2Q9BZW4 377 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 SLC39A8Q9C0K1 460 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 C6orf106Q9H6K1 298 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-207ENST00000486572 LUC7LQ9NQ29 371 aaKnown RBP18.54■□□□□ 0.56
COL1A1-207ENST00000486572 RCOR3Q9P2K3 495 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-207ENST00000486572 IL36AQ9UHA7 158 aa18.54■□□□□ 0.56
COL1A1-207ENST00000486572 EVLQ9UI08 416 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-207ENST00000486572 SOWAHDA6NJG2 315 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 LRRC72A6NJI9 287 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 PATE3B3GLJ2 98 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 SLC7A4O43246 635 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 TMCC1O94876 653 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 KRT7P08729 469 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 CCNHP51946 323 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-207ENST00000486572 TAS2R40P59535 323 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 POM121L1PQ3SYA9 428 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 INO80DQ53TQ3 878 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-207ENST00000486572 TRIM61Q5EBN2 209 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 TMCO3Q6UWJ1 677 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 ARHGAP12Q8IWW6 846 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 PLPP6Q8IY26 295 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 OR2AP1Q8NGE2 309 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 CEP76Q8TAP6 659 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 FAM71BQ8TC56 605 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 DNASE2BQ8WZ79 361 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 TSC1Q92574 1164 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 FAM131CQ96AQ9 280 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 IMPACTQ9P2X3 320 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 SUSD2Q9UGT4 822 aa18.53■□□□□ 0.56
COL1A1-207ENST00000486572 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-207ENST00000486572 LNP1A1A4G5 178 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 FAM47DPA6NHR8 397 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 KPNA3O00505 521 aaPredicted RBP18.52■□□□□ 0.56
COL1A1-207ENST00000486572 PRAMEF11O60813 436 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 GSRP00390 522 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 AMPD1P23109 780 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 MAOBP27338 520 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 PAPOLAP51003 745 aaKnown RBP18.52■□□□□ 0.56
COL1A1-207ENST00000486572 ADPRHP54922 357 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 CNTN1Q12860 1018 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms