RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ZMPSTE24O75844 475 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 L1CAMP32004 1257 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 MAPKAPK2P49137 400 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 SERPINH1P50454 418 aaKnown RBP18.02■□□□□ 0.48
COL6A1-204ENST00000486023 CLCN6P51797 869 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 FAM193AP78312 1265 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 IL9RQ01113 521 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 NRG1Q02297 640 aaPredicted RBP18.02■□□□□ 0.48
COL6A1-204ENST00000486023 SLC20A2Q08357 652 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 KCNT1Q5JUK3 1230 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 MANEALQ5VSG8 457 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 PRPF39Q86UA1 669 aaKnown RBP18.02■□□□□ 0.48
COL6A1-204ENST00000486023 OR6K2Q8NGY2 324 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 KLK6Q92876 244 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 ARHGEF2Q92974 986 aaKnown RBP18.02■□□□□ 0.48
COL6A1-204ENST00000486023 ARRDC3Q96B67 414 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 SERAC1Q96JX3 654 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 CNTNAP3BQ96NU0 1288 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 EPAS1Q99814 870 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 ACE2Q9BYF1 805 aaPredicted RBP18.02■□□□□ 0.48
COL6A1-204ENST00000486023 CNTNAP3Q9BZ76 1288 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 TRIM7Q9C029 511 aa18.02■□□□□ 0.48
COL6A1-204ENST00000486023 FNDC3AQ9Y2H6 1198 aaKnown RBP18.02■□□□□ 0.48
COL6A1-204ENST00000486023 PI4KAP42356 2102 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 BUB1O43683 1085 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 LEFTY1O75610 366 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 PRNPP04156 253 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 SPINK2P20155 84 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 GKP32189 559 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 ETFBP38117 255 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 PRKCIP41743 596 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 GRIA4P48058 902 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 RACK1P63244 317 aaKnown RBP18.01■□□□□ 0.47
COL6A1-204ENST00000486023 CARD16Q5EG05 197 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 PLEKHA7Q6IQ23 1121 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 PIP4P1Q86T03 277 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 MYOCQ99972 504 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 ORAI3Q9BRQ5 295 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 MAGEH1Q9H213 219 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
COL6A1-204ENST00000486023 ZDHHC6Q9H6R6 413 aa18.01■□□□□ 0.47
COL6A1-204ENST00000486023 HECAQ9UBI9 543 aaPredicted RBP18.01■□□□□ 0.47
COL6A1-204ENST00000486023 DAPK3O43293 454 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 PLRG1O43660 514 aaKnown RBP18■□□□□ 0.47
COL6A1-204ENST00000486023 GJB3O75712 270 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 RNF8O76064 485 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 PCDH8O95206 1070 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 TOP3BO95985 862 aaKnown RBP18■□□□□ 0.47
COL6A1-204ENST00000486023 GZMAP12544 262 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 CD38P28907 300 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 CCR5P51681 352 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 TPI1P60174 286 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 SCAPQ12770 1279 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 SLC14A1Q13336 389 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 FIGNQ5HY92 759 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 AGBL4Q5VU57 503 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 NAXDQ8IW45 347 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 TMIEQ8NEW7 156 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 SKA1Q96BD8 255 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 HEPHQ9BQS7 1158 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 CATSPERBQ9H7T0 1116 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 ANGPTL2Q9UKU9 493 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 AP4E1Q9UPM8 1137 aa18■□□□□ 0.47
COL6A1-204ENST00000486023 LUC7L2Q9Y383 392 aaKnown RBP18■□□□□ 0.47
COL6A1-204ENST00000486023 TMEM191CA6NGB0 347 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 GOLGA8CPA6NN73 597 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 H0Y8X5 98 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 SLC7A4O43246 635 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 RNGTTO60942 597 aaKnown RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 ZNF821O75541 412 aaPredicted RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 WNT1P04628 370 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 PBX1P40424 430 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 CCNHP51946 323 aaPredicted RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 TRIP6Q15654 476 aaKnown RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 CA9Q16790 459 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 VPS36Q86VN1 386 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 PCDH20Q8N6Y1 951 aaKnown RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 RTL3Q8N8U3 475 aaKnown RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 RNF214Q8ND24 703 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 RHBDD1Q8TEB9 315 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 CELF6Q96J87 481 aaKnown RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 XPO4Q9C0E2 1151 aaKnown RBP17.99■□□□□ 0.47
COL6A1-204ENST00000486023 CEP44Q9C0F1 390 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 OSGEPQ9NPF4 335 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 CAPN11Q9UMQ6 739 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 NEU3Q9UQ49 428 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 CA5BQ9Y2D0 317 aa17.99■□□□□ 0.47
COL6A1-204ENST00000486023 A0A1W2PQJ5 194 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 A0A1W2PQU0 124 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 UPK3BL1B0FP48 263 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 RASA4BC9J798 803 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 UPK3BL2E5RIL1 263 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 KRIT1O00522 736 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 SLC31A1O15431 190 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 RASA4O43374 803 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 KDELR3O43731 214 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 PRPSAP2O60256 369 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 CD160O95971 181 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 SERPING1P05155 500 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 PRLRP16471 622 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms