RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 CARNMT1Q8N4J0 409 aa17.44■□□□□ 0.38
VIM-205ENST00000485947 MAIP1Q8WWC4 291 aa17.44■□□□□ 0.38
VIM-205ENST00000485947 SORCS1Q8WY21 1168 aa17.44■□□□□ 0.38
VIM-205ENST00000485947 NTAN1Q96AB6 310 aa17.44■□□□□ 0.38
VIM-205ENST00000485947 PEBP4Q96S96 227 aa17.44■□□□□ 0.38
VIM-205ENST00000485947 ADAM33Q9BZ11 813 aa17.44■□□□□ 0.38
VIM-205ENST00000485947 FASNP49327 2511 aaKnown RBP17.43■□□□□ 0.38
VIM-205ENST00000485947 TARSL2A2RTX5 802 aaKnown RBP17.43■□□□□ 0.38
VIM-205ENST00000485947 CTAGE15A4D2H0 777 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 ZNF487B1APH4 448 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 CTAGE8P0CG41 777 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 ITPKAP23677 461 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 CXCR3P49682 368 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 IRX4P78413 519 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 NME3Q13232 169 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 ZNF211Q13398 564 aaPredicted RBP17.43■□□□□ 0.38
VIM-205ENST00000485947 PPP2R5EQ16537 467 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 HNRNPA1L2Q32P51 320 aaKnown RBP17.43■□□□□ 0.38
VIM-205ENST00000485947 ARL13BQ3SXY8 428 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 C5orf22Q49AR2 442 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 TXNRD3NBQ6F5E7 133 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 TCEAL6Q6IPX3 200 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 CTAGE6Q86UF2 777 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 MAP7D3Q8IWC1 876 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 CTAGE4Q8IX94 777 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 WFDC5Q8TCV5 224 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 CYB5D2Q8WUJ1 264 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 DNASE2BQ8WZ79 361 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 TCEAL3Q969E4 200 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 TOE1Q96GM8 510 aaKnown RBP17.43■□□□□ 0.38
VIM-205ENST00000485947 C1orf74Q96LT6 269 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 SNRNP25Q9BV90 132 aaKnown RBP17.43■□□□□ 0.38
VIM-205ENST00000485947 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 SMOC1Q9H4F8 434 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 PRSS16Q9NQE7 514 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 RXFP3Q9NSD7 469 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 PIGVQ9NUD9 493 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 TMEM74BQ9NUR3 256 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 XPO7Q9UIA9 1087 aaKnown RBP17.43■□□□□ 0.38
VIM-205ENST00000485947 EFR3BQ9Y2G0 817 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 NUP205Q92621 2012 aa17.43■□□□□ 0.38
VIM-205ENST00000485947 CKAP5Q14008 2032 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 LRRD1A4D1F6 860 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 RNASEH1O60930 286 aaKnown RBP17.42■□□□□ 0.38
VIM-205ENST00000485947 CLDN11O75508 207 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 SYPP08247 313 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 KDELR1P24390 212 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 NNMTP40261 264 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 CSKP41240 450 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 TUBB4BP68371 445 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 ECT2LQ008S8 904 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 SCAPQ12770 1279 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 AUHQ13825 339 aaKnown RBP17.42■□□□□ 0.38
VIM-205ENST00000485947 SMTNL2Q2TAL5 461 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 PLEKHG6Q3KR16 790 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
VIM-205ENST00000485947 ATP13A4Q4VNC1 1196 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 RAB6CQ53S08 254 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 PPM1JQ5JR12 505 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 PITRM1Q5JRX3 1037 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 SPOCD1Q6ZMY3 1216 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 USP30Q70CQ3 517 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 FAM131BQ86XD5 332 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 CCDC50Q8IVM0 306 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 FAM71BQ8TC56 605 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 HSPA12BQ96MM6 686 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 RAB6CQ9H0N0 254 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 WDCPQ9H6R7 721 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 CAPN10Q9HC96 672 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 ARHGEF38Q9NXL2 777 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 INTS6Q9UL03 887 aaKnown RBP17.42■□□□□ 0.38
VIM-205ENST00000485947 FZD10Q9ULW2 581 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 AP4E1Q9UPM8 1137 aa17.42■□□□□ 0.38
VIM-205ENST00000485947 METTL12A8MUP2 240 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 PDE2AO00408 941 aaPredicted RBP17.41■□□□□ 0.38
VIM-205ENST00000485947 FGGP02679 453 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 DNTTP04053 509 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 CSRP1P21291 193 aaKnown RBP17.41■□□□□ 0.38
VIM-205ENST00000485947 ARSEP51690 589 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 ZNF135P52742 658 aaPredicted RBP17.41■□□□□ 0.38
VIM-205ENST00000485947 DPYSL2Q16555 572 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 LONRF2Q1L5Z9 754 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 TFDP3Q5H9I0 405 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 FSCBQ5H9T9 825 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 EFHC2Q5JST6 749 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 KCNT1Q5JUK3 1230 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 RNF219Q5W0B1 726 aaPredicted RBP17.41■□□□□ 0.38
VIM-205ENST00000485947 ZNF776Q68DI1 518 aaPredicted RBP17.41■□□□□ 0.38
VIM-205ENST00000485947 FBXL22Q6P050 247 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 ARMCX6Q7L4S7 300 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 SLC13A5Q86YT5 568 aaPredicted RBP17.41■□□□□ 0.38
VIM-205ENST00000485947 CFAP52Q8N1V2 620 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 KCTD6Q8NC69 237 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 HSPH1Q92598 858 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 MYO19Q96H55 970 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 MS4A14Q96JA4 679 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 RPRD1AQ96P16 312 aaPredicted RBP17.41■□□□□ 0.38
VIM-205ENST00000485947 OSBPL8Q9BZF1 889 aa17.41■□□□□ 0.38
VIM-205ENST00000485947 ZDHHC5Q9C0B5 715 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms