RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NEDD8-MDP1E9PL57 170 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
SND1-212ENST00000485871 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
SND1-212ENST00000485871 METTL18O95568 372 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 NFATC1O95644 943 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 IFNB1P01574 187 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CISD3P0C7P0 127 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 PSMC3P17980 439 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CD70P32970 193 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CD68P34810 354 aaPredicted RBP11.54□□□□□ -0.56
SND1-212ENST00000485871 ETFBP38117 255 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 DMTNQ08495 405 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CDH18Q13634 790 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 GRM2Q14416 872 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 PDGFRLQ15198 375 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 TEX44Q53QW1 395 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CEP128Q6ZU80 1094 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 GSTA5Q7RTV2 222 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 C12orf40Q86WS4 652 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 GSPT2Q8IYD1 628 aaKnown RBP11.54□□□□□ -0.56
SND1-212ENST00000485871 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 PHTF2Q8N3S3 785 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 DCAF4L2Q8NA75 395 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CCHCR1Q8TD31 782 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 BHMTQ93088 406 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CHFRQ96EP1 664 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 TEKT5Q96M29 485 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 VAT1Q99536 393 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 SLC2A11Q9BYW1 496 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 TRIM31Q9BZY9 425 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 DPH5Q9H2P9 285 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 EBF3Q9H4W6 596 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 ECT2Q9H8V3 914 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 ZDHHC18Q9NUE0 388 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 WHRNQ9P202 907 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 KIAA1522Q9P206 1035 aaPredicted RBP11.54□□□□□ -0.56
SND1-212ENST00000485871 PAK5Q9P286 719 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 MTRF1LQ9UGC7 380 aaKnown RBP11.54□□□□□ -0.56
SND1-212ENST00000485871 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
SND1-212ENST00000485871 ACTL7AQ9Y615 435 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 NUMBLQ9Y6R0 609 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 MYLKQ15746 1914 aa11.54□□□□□ -0.56
SND1-212ENST00000485871 CXorf51AA0A1B0GTR3 108 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 GOLGA6L10A6NI86 522 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 CHADO15335 359 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 SNAP91O60641 907 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 OPHN1O60890 802 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 RNF40O75150 1001 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 SYF2O95926 243 aaKnown RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 HLA-DQB2P05538 268 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ADH5P11766 374 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 CCNB1P14635 433 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 MAGEA6P43360 314 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 VPS41P49754 854 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 OXCT1P55809 520 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 EIF3BP55884 814 aaKnown RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 CAV1Q03135 178 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 GAD2Q05329 585 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 SLC10A7Q0GE19 358 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 GPS1Q13098 491 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 SLC12A1Q13621 1099 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 RUNX3Q13761 415 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 HNRNPDQ14103 355 aaKnown RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 SMAD2Q15796 467 aaKnown RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 ANO4Q32M45 955 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 PLEKHG6Q3KR16 790 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 FUT11Q495W5 492 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 RNASEH2BQ5TBB1 312 aaKnown RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 HIBCHQ6NVY1 386 aaPredicted RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 C4orf22Q6V702 233 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 BBOF1Q8ND07 529 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 CPT1BQ92523 772 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ART4Q93070 314 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ATP2A3Q93084 1043 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ZNF599Q96NL3 588 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 FMO2Q99518 471 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 PHF7Q9BWX1 381 aaPredicted RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 CEP41Q9BYV8 373 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 SP110Q9HB58 689 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ATP13A1Q9HD20 1204 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 THG1LQ9NWX6 298 aaKnown RBP11.53□□□□□ -0.56
SND1-212ENST00000485871 VPS18Q9P253 973 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 IGSF9Q9P2J2 1179 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ASIC3Q9UHC3 531 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ADAM21Q9UKJ8 722 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 TRHDEQ9UKU6 1024 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 FAM50BQ9Y247 325 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 ATP8A1Q9Y2Q0 1164 aa11.53□□□□□ -0.56
SND1-212ENST00000485871 MUSKO15146 869 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 TRIM24O15164 1050 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
SND1-212ENST00000485871 ADH1CP00326 375 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 JCHAINP01591 159 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 PABPC1P11940 636 aaKnown RBP11.52□□□□□ -0.57
SND1-212ENST00000485871 NUMBP49757 651 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 SEMA5AQ13591 1074 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 KCNJ11Q14654 390 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 PITRM1Q5JRX3 1037 aa11.52□□□□□ -0.57
SND1-212ENST00000485871 TMCO4Q5TGY1 634 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms