RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 RYBPQ8N488 228 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 PAF1Q8N7H5 531 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 CCNYQ8ND76 341 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 OR7D4Q8NG98 312 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 WFDC5Q8TCV5 224 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 GANCQ8TET4 914 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 MAIP1Q8WWC4 291 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 FATE1Q969F0 183 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 RNF25Q96BH1 459 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 FAF2Q96CS3 445 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SIPA1Q96FS4 1042 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 HMCESQ96FZ2 354 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 PPP1R16AQ96I34 528 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 LRIG1Q96JA1 1093 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 RPL10LQ96L21 214 aaKnown RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 CNTNAP3BQ96NU0 1288 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 TSGA13Q96PP4 275 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 NAP1L3Q99457 506 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 OSBPL1AQ9BXW6 950 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 FRMD8P1Q9BZ68 369 aaPredicted RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 CNTNAP3Q9BZ76 1288 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF212Q9UDV6 495 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SEPT3Q9UH03 358 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 AMACRQ9UHK6 382 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SLCO3A1Q9UIG8 710 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 SALL4Q9UJQ4 1053 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 INTS6Q9UL03 887 aaKnown RBP8.43□□□□□ -1.06
SF3A1-208ENST00000485618 RAB23Q9ULC3 237 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 TFR2Q9UP52 801 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 JRKLQ9Y4A0 524 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 HYOU1Q9Y4L1 999 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 HEY1Q9Y5J3 304 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 DMXL1Q9Y485 3027 aa8.43□□□□□ -1.06
SF3A1-208ENST00000485618 OTOGLQ3ZCN5 2332 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 EP300Q09472 2414 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-208ENST00000485618 A0A1W2PQ67 120 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 A0A1W2PQF6 199 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 HACD1B0YJ81 288 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 PRR5-ARHGAP8B1AHC4 643 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 MCF2LO15068 1137 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CST8O60676 142 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 ADAM23O75077 832 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 FTCDO95954 541 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 IGSF6O95976 241 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 GSRP00390 522 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CD48P09326 243 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 TCF4P15884 667 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CA4P22748 312 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 IL4RP24394 825 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 PRKCHP24723 683 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CCNCP24863 283 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 PTPN7P35236 360 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CDKN2BP42772 138 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 TNNT3P45378 269 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-208ENST00000485618 IRAK1P51617 712 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 RHOAP61586 193 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 ARHGAP8P85298 464 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 SATB1Q01826 763 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 NSUN2Q08J23 767 aaKnown RBP eCLIP8.42□□□□□ -1.06
SF3A1-208ENST00000485618 MESP2Q0VG99 397 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 GALNT2Q10471 571 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF235Q14590 738 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 LPAL2Q16609 132 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 PTPRNQ16849 979 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CARD16Q5EG05 197 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 RALGPS1Q5JS13 557 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF569Q5MCW4 686 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CFAP58Q5T655 872 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 MARC1Q5VT66 337 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 AFMIDQ63HM1 303 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 KAZNQ674X7 775 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 SLC9A4Q6AI14 798 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 ANO7Q6IWH7 933 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 MFSD7Q6UXD7 560 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 KIAA1324Q6UXG2 1013 aaKnown RBP8.42□□□□□ -1.06
SF3A1-208ENST00000485618 LINGO4Q6UY18 593 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 KBTBD6Q86V97 674 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 WDR5BQ86VZ2 330 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 TMPRSS6Q8IU80 811 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 PLD5Q8N7P1 536 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 TMIEQ8NEW7 156 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 PCDH19Q8TAB3 1148 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 HMGB4Q8WW32 186 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 EZH1Q92800 747 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-208ENST00000485618 NELL1Q92832 810 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 COL26A1Q96A83 441 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 LRRC45Q96CN5 670 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 P2RY11Q96G91 374 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 HES6Q96HZ4 224 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CELF6Q96J87 481 aaKnown RBP8.42□□□□□ -1.06
SF3A1-208ENST00000485618 MRGPRX3Q96LB0 322 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 GDAP1L1Q96MZ0 367 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 ACOX2Q99424 681 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 CINPQ9BW66 212 aaPredicted RBP8.42□□□□□ -1.06
SF3A1-208ENST00000485618 MAGEB5Q9BZ81 275 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 OSBPL8Q9BZF1 889 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 SLC39A8Q9C0K1 460 aa8.42□□□□□ -1.06
SF3A1-208ENST00000485618 KLHL11Q9NVR0 708 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms