RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 PCDH20Q8N6Y1 951 aaKnown RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 TSTD1Q8NFU3 115 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 P3H4Q92791 437 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 FATE1Q969F0 183 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 MTG2Q9H4K7 406 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 FBRSQ9HAH7 460 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 PRSS16Q9NQE7 514 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 ZKSCAN5Q9Y2L8 839 aa20.29■□□□□ 0.84
COL6A2-208ENST00000485591 FCF1Q9Y324 198 aaKnown RBP20.29■□□□□ 0.84
COL6A2-208ENST00000485591 PPP1R12AO14974 1030 aaPredicted RBP20.28■□□□□ 0.84
COL6A2-208ENST00000485591 SIN3BO75182 1162 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 ZNF821O75541 412 aaPredicted RBP20.28■□□□□ 0.84
COL6A2-208ENST00000485591 PEX11BO96011 259 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 VAV1P15498 845 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 CCNCP24863 283 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 GNG11P61952 73 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 ZNF33AQ06730 810 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 PPIDQ08752 370 aaKnown RBP20.28■□□□□ 0.84
COL6A2-208ENST00000485591 KLF1Q13351 362 aaPredicted RBP20.28■□□□□ 0.84
COL6A2-208ENST00000485591 PDK1Q15118 436 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 C9orf64Q5T6V5 341 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 TMCO4Q5TGY1 634 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 Q6ZVU0 165 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 MAML2Q8IZL2 1156 aaPredicted RBP20.28■□□□□ 0.84
COL6A2-208ENST00000485591 HHIPQ96QV1 700 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 BRD8Q9H0E9 1235 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.28■□□□□ 0.84
COL6A2-208ENST00000485591 FBXO4Q9UKT5 387 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 CACNA1IQ9P0X4 2223 aa20.28■□□□□ 0.84
COL6A2-208ENST00000485591 EML5Q05BV3 1969 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 TCRBV21S2A2A0A5A6 115 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 GALR2O43603 387 aaPredicted RBP20.27■□□□□ 0.84
COL6A2-208ENST00000485591 APBB3O95704 486 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 ATP1A1P05023 1023 aaKnown RBP20.27■□□□□ 0.84
COL6A2-208ENST00000485591 TDGF1P13385 188 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 HOXA6P31267 233 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 COPAP53621 1224 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 ELAVL3Q14576 367 aaKnown RBP20.27■□□□□ 0.84
COL6A2-208ENST00000485591 CCDC181Q5TID7 509 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 OR2T3Q8NH03 318 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 HAUS1Q96CS2 278 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 CCDC114Q96M63 670 aa20.27■□□□□ 0.84
COL6A2-208ENST00000485591 SAE1Q9UBE0 346 aaPredicted RBP20.27■□□□□ 0.84
COL6A2-208ENST00000485591 ALOX15BO15296 676 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 ALDH1A2O94788 518 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 GSRP00390 522 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 C7P10643 843 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 GABRG2P18507 467 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 LBRQ14739 615 aaKnown RBP20.26■□□□□ 0.83
COL6A2-208ENST00000485591 NOMO1Q15155 1222 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 CYTH1Q15438 398 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 RASSF3Q86WH2 238 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 SLC13A5Q86YT5 568 aaPredicted RBP20.26■□□□□ 0.83
COL6A2-208ENST00000485591 PLPP6Q8IY26 295 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 CCDC13Q8IYE1 715 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 CCNYQ8ND76 341 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 OR2A12Q8NGT7 310 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 NSMCE1Q8WV22 266 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 MAML1Q92585 1016 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 WDR24Q96S15 920 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 LGMNQ99538 433 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 RSPH9Q9H1X1 276 aaPredicted RBP20.26■□□□□ 0.83
COL6A2-208ENST00000485591 TNKS2Q9H2K2 1166 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 LHX3Q9UBR4 397 aa20.26■□□□□ 0.83
COL6A2-208ENST00000485591 ANKRD36A6QL64 1941 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 PLXND1Q9Y4D7 1925 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 MATN3O15232 486 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 RECQLP46063 649 aaPredicted RBP20.25■□□□□ 0.83
COL6A2-208ENST00000485591 RHOAP61586 193 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 OTUD4Q01804 1114 aaKnown RBP20.25■□□□□ 0.83
COL6A2-208ENST00000485591 SLC10A7Q0GE19 358 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 XRCC4Q13426 336 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 HNRNPDQ14103 355 aaKnown RBP20.25■□□□□ 0.83
COL6A2-208ENST00000485591 PRKD1Q15139 912 aaPredicted RBP20.25■□□□□ 0.83
COL6A2-208ENST00000485591 CARD16Q5EG05 197 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 ANO7Q6IWH7 933 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 STK40Q8N2I9 435 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 TTC13Q8NBP0 860 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 MDGA1Q8NFP4 955 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 OR2AP1Q8NGE2 309 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 ACTL9Q8TC94 416 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 ERLEC1Q96DZ1 483 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 PSKH2Q96QS6 385 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 CINPQ9BW66 212 aaPredicted RBP20.25■□□□□ 0.83
COL6A2-208ENST00000485591 TM6SF2Q9BZW4 377 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 MKRN2Q9H000 416 aaKnown RBP20.25■□□□□ 0.83
COL6A2-208ENST00000485591 SEPT3Q9UH03 358 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 EBF1Q9UH73 591 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 SNX12Q9UMY4 172 aa20.25■□□□□ 0.83
COL6A2-208ENST00000485591 HACD1B0YJ81 288 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 MCF2LO15068 1137 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 ZBTB24O43167 697 aaPredicted RBP20.24■□□□□ 0.83
COL6A2-208ENST00000485591 NDUFV2P19404 249 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 CXCR5P32302 372 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 SNRPD1P62314 119 aaKnown RBP20.24■□□□□ 0.83
COL6A2-208ENST00000485591 ANGPT1Q15389 498 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 ZNF528Q3MIS6 628 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 MARC1Q5VT66 337 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 TSSK4Q6SA08 328 aa20.24■□□□□ 0.83
COL6A2-208ENST00000485591 BBS5Q8N3I7 341 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms