RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 ZNF33AQ06730 810 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 DPYSL2Q16555 572 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 CA9Q16790 459 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 WDR45BQ5MNZ6 344 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 DAB2IPQ5VWQ8 1189 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 C22orf39Q6P5X5 142 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 TMCO3Q6UWJ1 677 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 LINGO4Q6UY18 593 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 Q6ZVU0 165 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 ARMCX6Q7L4S7 300 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 RABEPKQ7Z6M1 372 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 FAM124AQ86V42 546 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 UMODL1-AS1Q8N2C9 162 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 STK40Q8N2I9 435 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 DCLK2Q8N568 766 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 PCDH20Q8N6Y1 951 aaKnown RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 FRMD1Q8N878 549 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 SPC24Q8NBT2 197 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 KCTD6Q8NC69 237 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 CADM4Q8NFZ8 388 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 FRS2Q8WU20 508 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 PPP1R16AQ96I34 528 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 CALR3Q96L12 384 aaKnown RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 KCTD15Q96SI1 283 aaPredicted RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 BAG1Q99933 345 aaPredicted RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 GPR174Q9BXC1 333 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 ACE2Q9BYF1 805 aaPredicted RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 PABPC3Q9H361 631 aaKnown RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 MTG2Q9H4K7 406 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 SGK2Q9HBY8 427 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 OSGEPQ9NPF4 335 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 VPS45Q9NRW7 570 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 NDFIP2Q9NV92 336 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 FBXL12Q9NXK8 326 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 WSB2Q9NYS7 404 aaPredicted RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 RCOR3Q9P2K3 495 aaPredicted RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 MBD1Q9UIS9 605 aaPredicted RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 PCDHA13Q9Y5I0 950 aa7.98□□□□□ -1.13
MACF1-220ENST00000485063 EPN1Q9Y6I3 576 aaPredicted RBP7.98□□□□□ -1.13
MACF1-220ENST00000485063 TNRC6BQ9UPQ9 1833 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 A0A1W2PP55 124 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 BCLAF3A2AJT9 711 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 LRRC72A6NJI9 287 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 DFFAO00273 331 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 KHNYNO15037 678 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 MID1O15344 667 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 NRDCO43847 1150 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 RNASEH2AO75792 299 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 MTA2O94776 668 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 NDUFA10O95299 355 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 LCA5LO95447 670 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 MT-CO1P00395 513 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 IGLV3-19P01714 112 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 ZNF806P0C7X5 589 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 VAV1P15498 845 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 GNSP15586 552 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 SDHBP21912 280 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 GLDCP23378 1020 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 IL1R2P27930 398 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 CHRNA3P32297 505 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 SLC1A1P43005 524 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 NAP1L1P55209 391 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 GSDMDP57764 484 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 SLC25A11Q02978 314 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 LMNB2Q03252 620 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 SERINC3Q13530 473 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 PDK2Q15119 407 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 CSRP2Q16527 193 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 INO80DQ53TQ3 878 aaPredicted RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 CARD16Q5EG05 197 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 POLNQ7Z5Q5 900 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 SYT12Q8IV01 421 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 KIAA2013Q8IYS2 634 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 BBS5Q8N3I7 341 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 RYBPQ8N488 228 aaPredicted RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 HDDC3Q8N4P3 179 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 DEFB119Q8N690 84 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 CEP76Q8TAP6 659 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 PIP4K2CQ8TBX8 421 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 NSMCE1Q8WV22 266 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 PIGKQ92643 395 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 ISG20Q96AZ6 181 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 HSPA12BQ96MM6 686 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 HEPHQ9BQS7 1158 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 NUSAP1Q9BXS6 441 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 CALN1Q9BXU9 219 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 MAK16Q9BXY0 300 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 PCED1AQ9H1Q7 454 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 SP110Q9HB58 689 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 PCDH18Q9HCL0 1135 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 SEMA4GQ9NTN9 838 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 HAUS2Q9NVX0 235 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 CWC15Q9P013 229 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 UBA2Q9UBT2 640 aaPredicted RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 SUSD2Q9UGT4 822 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 IL36AQ9UHA7 158 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 FZD4Q9ULV1 537 aa7.97□□□□□ -1.13
MACF1-220ENST00000485063 TPX2Q9ULW0 747 aaKnown RBP7.97□□□□□ -1.13
MACF1-220ENST00000485063 NEU3Q9UQ49 428 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms