RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TBC1D3GQ6DHY5 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3CQ6IPX1 549 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 LAYNQ6UX15 382 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 LEKR1Q6ZMV7 388 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 DPY19L3Q6ZPD9 716 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TBC1D3Q8IZP1 549 aaPredicted RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 DEFB124Q8NES8 71 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 TMIEQ8NEW7 156 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 IQCDQ96DY2 449 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 CCDC114Q96M63 670 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 ZDHHC5Q9C0B5 715 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 MAGEH1Q9H213 219 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 NOL6Q9H6R4 1146 aaKnown RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 IL21RQ9HBE5 538 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 MYO1AQ9UBC5 1043 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 PCSK1NQ9UHG2 260 aa13.17□□□□□ -0.3
HDAC1-209ENST00000484305 FCF1Q9Y324 198 aaKnown RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 FARP1Q9Y4F1 1045 aaPredicted RBP13.17□□□□□ -0.3
HDAC1-209ENST00000484305 CABIN1Q9Y6J0 2220 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 A0A1W2PPC4 97 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 KPNA3O00505 521 aaPredicted RBP13.16□□□□□ -0.3
HDAC1-209ENST00000484305 PLRG1O43660 514 aaKnown RBP13.16□□□□□ -0.3
HDAC1-209ENST00000484305 RAMP2O60895 175 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 CEACAM1P13688 526 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 GRIA4P48058 902 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 DNA2P51530 1060 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 CCR5P51681 352 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 PPP2CBP62714 309 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 PPP2CAP67775 309 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 CA9Q16790 459 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 HLA-BQ31612 363 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 KCNT1Q5JUK3 1230 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 PIP4P1Q86T03 277 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 RTL3Q8N8U3 475 aaKnown RBP13.16□□□□□ -0.3
HDAC1-209ENST00000484305 GRIN3AQ8TCU5 1115 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 ARRDC3Q96B67 414 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 PEBP4Q96S96 227 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 EPAS1Q99814 870 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 CEP44Q9C0F1 390 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 GAREM1Q9H706 876 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 AP4E1Q9UPM8 1137 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
HDAC1-209ENST00000484305 A0A087X0T9 212 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 CXorf51AA0A1B0GTR3 108 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 WNT9AO14904 365 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 SLC7A4O43246 635 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 KDELR3O43731 214 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 LEFTY1O75610 366 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 RNF8O76064 485 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 PRNPP04156 253 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 FAM228BP0C875 321 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 MYBL1P10243 752 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 MIPP30301 263 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 RECQLP46063 649 aaPredicted RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 TAS2R38P59533 333 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 RACK1P63244 317 aaKnown RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 TEAD4Q15561 434 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 KIF19Q2TAC6 998 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 CARD16Q5EG05 197 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 ERMARDQ5T6L9 678 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 PIP5KL1Q5T9C9 394 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 CYP4V2Q6ZWL3 525 aaPredicted RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 PCDH20Q8N6Y1 951 aaKnown RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 FNIP1Q8TF40 1166 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 TRIM11Q96F44 468 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 SLC6A18Q96N87 628 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 TM6SF2Q9BZW4 377 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 KLC2Q9H0B6 622 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 DHX35Q9H5Z1 703 aaKnown RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 MRPL47Q9HD33 250 aaKnown RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 ARHGAP20Q9P2F6 1191 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 IL36AQ9UHA7 158 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 HPCAL4Q9UM19 191 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 ANKRD6Q9Y2G4 727 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
HDAC1-209ENST00000484305 SNX11Q9Y5W9 270 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 WASF2Q9Y6W5 498 aa13.15□□□□□ -0.3
HDAC1-209ENST00000484305 WASH4PA8MWX3 477 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 RASA4BC9J798 803 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 KCNK3O14649 394 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 RASA4O43374 803 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 LATO43561 262 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 PRPSAP2O60256 369 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 LRCH4O75427 683 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 CER1O95813 267 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 WNT1P04628 370 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 TPM3P06753 285 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 MAT2AP31153 395 aaKnown RBP13.14□□□□□ -0.31
HDAC1-209ENST00000484305 CCNHP51946 323 aaPredicted RBP13.14□□□□□ -0.31
HDAC1-209ENST00000484305 TPI1P60174 286 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 SLC14A1Q13336 389 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms