RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 PIP4K2CQ8TBX8 421 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 PIGKQ92643 395 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 CCDC114Q96M63 670 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 CSPG4P5Q96PW8 444 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 OMDQ99983 421 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 TM6SF2Q9BZW4 377 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 CEP44Q9C0F1 390 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 SLC39A8Q9C0K1 460 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 LRRC19Q9H756 370 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 ETNK2Q9NVF9 386 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 DONSONQ9NYP3 566 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 IMPACTQ9P2X3 320 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 LCMT1Q9UIC8 334 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 SCML1Q9UN30 329 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 NCKAP1Q9Y2A7 1128 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 MFHAS1Q9Y4C4 1052 aa13.66□□□□□ -0.22
SSR1-208ENST00000483409 EPN1Q9Y6I3 576 aaPredicted RBP13.66□□□□□ -0.22
SSR1-208ENST00000483409 PLXNA2O75051 1894 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 ZSCAN5CA6NGD5 496 aaPredicted RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 MEI4A8MW99 385 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 C1QTNF3-AMACRE9PGA6 284 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 DFFAO00273 331 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 PLK4O00444 970 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 MCF2LO15068 1137 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 ALOX15BO15296 676 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 TMCC1O94876 653 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 NDUFA10O95299 355 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 SEMA4FO95754 770 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 CTSLP07711 333 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 CD48P09326 243 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 C5AR1P21730 350 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 CHRNA3P32297 505 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 ARHGAP25P42331 645 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 NOP2P46087 812 aaKnown RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 PAPOLAP51003 745 aaKnown RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 NDST2P52849 883 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 SF3A2Q15428 464 aaKnown RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 CSRP2Q16527 193 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 PLA2G2CQ5R387 149 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 ZFYVE27Q5T4F4 411 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 TCEAL6Q6IPX3 200 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 RAD9BQ6WBX8 426 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 DPY19L3Q6ZPD9 716 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 USP30Q70CQ3 517 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 ARHGAP12Q8IWW6 846 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 TP53INP2Q8IXH6 220 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 PCDH20Q8N6Y1 951 aaKnown RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 TSC1Q92574 1164 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 TCEAL3Q969E4 200 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 ZNF419Q96HQ0 510 aaPredicted RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 BAG1Q99933 345 aaPredicted RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 BTBD1Q9H0C5 482 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 NEUROG2Q9H2A3 272 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 C6orf106Q9H6K1 298 aaPredicted RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 TMEM74BQ9NUR3 256 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 PPM1HQ9ULR3 514 aa13.65□□□□□ -0.22
SSR1-208ENST00000483409 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.65□□□□□ -0.22
SSR1-208ENST00000483409 LAMA1P25391 3075 aa13.65□□□□□ -0.23
SSR1-208ENST00000483409 CXorf51AA0A1B0GTR3 108 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 FAM47DPA6NHR8 397 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 GOLGA6L6A8MZA4 724 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 PATE3B3GLJ2 98 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 J3KR12 359 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 RNF103O00237 685 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 IPO7O95373 1038 aaKnown RBP13.64□□□□□ -0.23
SSR1-208ENST00000483409 KRT7P08729 469 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 MAOBP27338 520 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 DRD3P35462 400 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 ARSEP51690 589 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
SSR1-208ENST00000483409 SFSWAPQ12872 951 aaKnown RBP13.64□□□□□ -0.23
SSR1-208ENST00000483409 DPYSL3Q14195 570 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 CARD16Q5EG05 197 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 ATXN7L2Q5T6C5 722 aaPredicted RBP13.64□□□□□ -0.23
SSR1-208ENST00000483409 FAM46CQ5VWP2 391 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 AFMIDQ63HM1 303 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 TMCO3Q6UWJ1 677 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 ARHGAP36Q6ZRI8 547 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 PRR23CQ6ZRP0 262 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 SYT12Q8IV01 421 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 TMEM139Q8IV31 216 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 RGL4Q8IZJ4 473 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 RYBPQ8N488 228 aaPredicted RBP13.64□□□□□ -0.23
SSR1-208ENST00000483409 GPR161Q8N6U8 529 aaKnown RBP13.64□□□□□ -0.23
SSR1-208ENST00000483409 KCTD6Q8NC69 237 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 ACRBPQ8NEB7 543 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 OR6K2Q8NGY2 324 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 SNX19Q92543 992 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 FOXJ1Q92949 421 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 CALN1Q9BXU9 219 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 SGK2Q9HBY8 427 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 LUC7LQ9NQ29 371 aaKnown RBP13.64□□□□□ -0.23
SSR1-208ENST00000483409 VPS45Q9NRW7 570 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 IL36AQ9UHA7 158 aa13.64□□□□□ -0.23
SSR1-208ENST00000483409 PILRBQ9UKJ0 227 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms